Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq14 221 1e-52 seq7 95.1 1e-14 >seq14 Length=13523219 Score = 221 bits (244), Expect = 1e-52 Identities = 990/1543 (64%), Gaps = 54/1543 (3%) Strand=Plus/Minus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952 ||||| | |||||||| || | ||| || | | | || | ||||| ||| | | | Sbjct 9107162 TTGACGATCTGAAACTCTCCGGACAGGACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCC 9107103 Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC 147012 || | ||||| || ||||| | || ||||| |||| || || ||||| |||| | Sbjct 9107102 TCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGCATCGGGGCCAGC 9107043 Query 147013 AACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAA-AGTTTGCCAGTCCCA 147071 | || || | || |||| | ||| || ||||||| || || ||||||||| Sbjct 9107042 AGCAGGCTGTTCCTCACGCCGTGCTTGGCGATCTTTTCCTTCAGCAGCTT-CCAGTCCCA 9106984 Query 147072 CA--TCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGA 147129 || ||| | ||||||| | |||||||||||||||||| | || ||| | ||| Sbjct 9106983 CAGGTCG--GTGGGCGTCTTCTCCCACATGTCGTACTGGAGGATGCCCTTGCTGACAGGA 9106926 Query 147130 CTGCCAGCGAACGTAGTGTAGCTTCCG---TCGCGCTGCGCCAATTCACAGCTTGCCTCG 147186 | ||| || | || |||| || ||| ||||| || || ||||| ||||| Sbjct 9106925 CAGCCTTCGTATGTCTCGTAGGGGCCCAACTCG-GCTGC--CAGCTCGCAGCTCGCCTCC 9106869 Query 147187 AGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTC 147246 || || | ||||| ||||| || ||| || |||| || | || ||| ||| Sbjct 9106868 AGGGCGGCGTAGTAGATGGTCTCAAAGATCTGGATGTTCAGCAGCTGAGCCTCTGGGCTT 9106809 Query 147247 TCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATA 147306 || | || ||||| || | ||||| |||||||||||||||| |||| || || Sbjct 9106808 TCAAAGGGGTAACGCATCAGGATGAAGGCGTCGGCCAAACCCTGGACGCCGATTCCAATT 9106749 Query 147307 GGTCGATGCTTTTCGTTGC-----TGCGCTTCGCGCTCGCTATGGGATAGTGGTTGCGAT 147361 || | || | |||| | || ||| || | |||| |||| ||| | Sbjct 9106748 GGCCTGTGGCGCTTGTTGGACTTATCAGCCTCGGGCAC----TGGG-TAGTAGTTAATCT 9106694 Query 147362 CAATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAAT 147421 | || |||||||| ||||| || | |||||| || | | | ||||| | ||| | Sbjct 9106693 CTATGATCTTGTTCAGGTTCTTGACGATAACTTTGGTCACAGACTCCAGTTTTTTGAAGT 9106634 Query 147422 CATAAGTCCCGTCTTCGAC-ACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAG 147480 || |||||| || | |||||| || ||| | ||||| || |||||||| ||| Sbjct 9106633 CAAAAGTCCGCTCGGGGGTGACGTAC--AT--GTTGAGAGCGATGGAGGCCAGATTACAG 9106578 Query 147481 ACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTT 147540 ||||| ||| ||| | | |||| | |||||||||| ||| |||||||||||||| Sbjct 9106577 ACGGCGACCTCATCGTCACTGGTGTATTCAACGATTTCGGTGCAGAGGTTGCTGCATTTG 9106518 Query 147541 ATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTAC 147600 ||| || | ||| || || ||||| |||| ||||| ||||||||| | ||||||||| Sbjct 9106517 ATGGTGCCAAGATTCTGTTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTAC 9106458 Query 147601 GGTCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTATG---CAGGTCCTGCGC--TC 147655 ||| || ||||| || | | |||| | || ||| | ||| || || Sbjct 9106457 GGTGTACCCGTCTCCGTCTGGGACT---CGATGACGGCGTGCCACAGCTGCTGAGCCTTC 9106401 Query 147656 GC-ACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCG 147714 | || |||| || || ||||| || || ||| | ||| | | ||||||||| Sbjct 9106400 ACAACACGCT--TGA-CCCGCCCCTCCTTCTCATACTGGGTGTAGAGCTTCTCAAACTCC 9106344 Query 147715 TCGCCGTAGCAATCGGCAAGGCCGGGACACT-GATGCGGACACATCAGCGACCA---CAT 147770 || || |||| ||| | || ||||| |||| | || ||||||||||| ||||| | Sbjct 9106343 TCCCCCCAGCACTCGTCCAGCCCGGGGCACTCGCTG-GGACACATCAGAGACCAGTCCTG 9106285 Query 147771 GTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATC 147830 || | | || || | ||| |||| || || | ||||| |||| | |||||| Sbjct 9106284 GTTGCTCTCG---ACTCTCTTCATGAACAAGTCGGGGATCCACAAGCCGTAGAAAAGATC 9106228 Query 147831 GC--GCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAATTAAGCACGCTATAGATG 147888 | || |||||| ||||| || |||| |||| | || | | | | | | Sbjct 9106227 TCTGGCTCTTTGC--TCCTCCTTCCCTGTGTTCTTCTTCAGCTCCAGGAAGTCAAACACG 9106170 Query 147889 TCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACC---TTTACGCTTTCCGCCCTGG 147945 || |||||| || || | ||| | ||| | || || | | || ||||||||| Sbjct 9106169 TCAAAGTGCCATGGCTCCAGGTACATGGCGAAGGCCCCGGGTCTCTTGTTGCCGCCCTGG 9106110 Query 147946 TCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTG 148005 ||||||| |||| || ||||||| | || | || |||||| |||| ||| | | || Sbjct 9106109 TCGACATAGCGCGCCGTGTTGTTGTAGACTCTCAGCATGGGGACCAGCCCGTTTGAGTTG 9106050 Query 148006 CCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATG 148065 ||||||||| | || | ||| || | || | | || ||||| || Sbjct 9106049 CCGTTGGTGCCAGCAATGTAGCTCCCCGTTGATCTGATGCAGCTGACCGCCACGCCGATT 9105990 Query 148066 CCGCCGCCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGATGCCGTCGATG 148125 || || | |||| || ||| || || | || || || |||||||||||| Sbjct 9105989 CCTCCAGCTGACTTGGAGATGAGGGCACACTGCTTCAGCGTGTCATAAATGCCGTCGATG 9105930 Query 148126 CTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCC 148185 ||||| | || | | |||| || || ||| || || | ||||| || Sbjct 9105929 CTGTCATCCTTCATGGTGAGCAGGAAGCAGCTGGACAGCTGAGGCCTGTTGGTTCCTGCG 9105870 Query 148186 GAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCA 148245 ||| || || ||| |||||| || ||| | || | | || | || ||||| Sbjct 9105869 TTGAAGAGCGTAGGAGACGCGTGGGTGAACCACTTCTCTGAGAGCAGGTTGTAGGTCTCG 9105810 Query 148246 ATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGT 148305 || ||| | ||||| | ||| || || | || || | ||||||||||||||| Sbjct 9105809 ATGGCGGCGTCGATAGCTGTTTTGTGGATACCAACAGCCACTCTCATGAGCATGTGCTGC 9105750 Query 148306 GGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAA 148365 || || ||||| |||| ||||||||| || | || | || || || ||| | Sbjct 9105749 GGCCGCTCGGCCACTTTGCCGTTGATCTTCAGCAAGTAGGAACGCTCCAGAGTCTTGAAG 9105690 Query 148366 CCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408 |||||| | ||||| |||||| ||| || |||||||| Sbjct 9105689 CCAAAGAAGTTGTAGGAGAAATCTCTGTCGAAAATGATGGCCG 9105647 >seq7 Length=16146599 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| |||| ||| | | | |||||||| || |||||||||||| | || || Sbjct 1869757 CGCAAGACCAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCG 1869698 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| ||||| || |||| |||| |||||||| || |||||||| ||||| ||||| Sbjct 1869697 TCTTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCCTCTTTG 1869638 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||||| || | | ||| | || || | ||||| || || | || | Sbjct 1869637 TCCTGGATTTTGGCCTTAACATTTTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATG 1869578 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || ||||| ||||| | || |||||||| Sbjct 1869577 GTCTTGCCGGTCAGGGTTTTCACAAAGATCTGCAT 1869543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476554453479000