Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_026242.1 Length=145704 Score E Sequences producing significant alignments: (Bits) Value seq3489 84.2 2e-11 seq13 84.2 2e-11 seq5 84.2 2e-11 >seq3489 Length=6267 Score = 84.2 bits (92), Expect = 2e-11 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 39784 ATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAATCCCCGGT 39843 ||||| |||||||||| |||||| |||||||||||||||||| ||||||||||||| || Sbjct 527 ATGGTGTAGTGGTTATCACGTCTGCTTTACACGCAGAAGGTCCTGGGTTCAATCCCCAGT 586 Query 39844 G 39844 | Sbjct 587 G 587 >seq13 Length=13670824 Score = 84.2 bits (92), Expect = 2e-11 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 39784 ATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAATCCCCGGT 39843 ||||| |||||||||| |||||| |||||||||||||||||| ||||||||||||| || Sbjct 13107501 ATGGTGTAGTGGTTATCACGTCTGCTTTACACGCAGAAGGTCCTGGGTTCAATCCCCAGT 13107442 Query 39844 G 39844 | Sbjct 13107441 G 13107441 >seq5 Length=18874890 Score = 84.2 bits (92), Expect = 2e-11 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 39784 ATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAATCCCCGGT 39843 ||||| |||||||||| |||||| |||||||||||||||||| ||||||||||||| || Sbjct 2693625 ATGGTGTAGTGGTTATCACGTCTGCTTTACACGCAGAAGGTCCTGGGTTCAATCCCCAGT 2693684 Query 39844 G 39844 | Sbjct 2693685 G 2693685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 466069302016000