Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq7 84.2 2e-11 >seq7 Length=16146599 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||| || || | || || || | ||||| | || ||||| ||| | Sbjct 1869771 ATGCAGATCTTTGTGAAGACCCTCACAGGCAAGACCATCACTCTGGAGGTCGAGCCCAGC 1869830 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || || ||| | || ||| || || ||||| || || || || || || ||| Sbjct 1869831 GACACCATTGAGAATGTCAAAGCTAAGATCCAGGATAAGGAAGGCATCCCTCCTGACCAG 1869890 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352 || || || || | || ||||| || || ||||||| | | |||| ||| |||| Sbjct 1869891 CAGAGGCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTGTC--CGACTACA 1869948 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAA 25404 |||| |||||||| |||||| | ||| | || | | ||||||||||||| Sbjct 1869949 ATATCCAAAAAGAGTCCACCCTCCATCTTGTCCTCCGTCTGAGAGGAGGAAA 1870000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445041405948000