Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq13 161 1e-34 >seq13 Length=13670824 Score = 161 bits (178), Expect = 1e-34 Identities = 142/177 (80%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| || || || | ||| || | |||||||||||| || | ||||||||| || ||||| Sbjct 11903251 CTTCAGTCCCGTGATGTGAGCGATCATGTAGGTGAGAAGTGCGTAGCTGGCGATATTGAA 11903192 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 ||||| ||||| ||||| || ||||| | |||||||||||| ||||| ||||| || || Sbjct 11903191 AGGGACGCCCAGACCCATATCACCCGAGCGCTGGTACAGCTGACACGACAGCTCGCCATC 11903132 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTC 147158 | |||||| |||||||| ||| |||||| || ||||| |||||| ||||||||| Sbjct 11903131 GATCACGTAGAACTGGCAGAGGGCGTGGCAGGGGGGCAGAGCCATGAGGGGCAGGTC 11903075 Score = 84.2 bits (92), Expect = 3e-11 Identities = 114/156 (73%), Gaps = 6/156 (4%) Strand=Plus/Minus Query 147283 GCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGC 147342 || |||||||||||||||||||| |||||||| || ||||||||||| | ||| | | Sbjct 11902511 GCACCAAAGTGCCTCCACTGGAAACCGTACACGGGTCCCAGGTCGCCCTCTTCTCTTTCC 11902452 Query 147343 GAGAAGCCCGCCCGCTT---GAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACT 147399 | ||| |||| | || || |||| | ||||||| ||| |||||||| ||| Sbjct 11902451 GTGAA-CCCG--AGATTATCCAGGAACTGTCGAGACCCGTTGGCTTCCCAGATCTTCACC 11902395 Query 147400 CCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCC 147435 || || | ||||||||||| | || || || ||| Sbjct 11902394 CCTTTCTCTGAGAGCTCCTTGGCGTTGGTTGACCCC 11902359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583418528460000