Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq14 161 1e-34 seq7 104 2e-17 >seq14 Length=13523219 Score = 161 bits (178), Expect = 1e-34 Identities = 900/1428 (63%), Gaps = 28/1428 (2%) Strand=Plus/Plus Query 7524 CTACTTGTTGAAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGT 7583 ||||||| |||| ||||||||| || || || || || |||||||| || | || Sbjct 9105711 CTACTTGCTGAAGATCAACGGCAAAGTGGCCGAGCGGCCGCAGCACATGCTCATGAGAGT 9105770 Query 7584 GGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTC 7643 ||| || || || ||| || || ||||||||| | || || ||| | || | || Sbjct 9105771 GGCTGTTGGTATCCACAAAACAGCTATCGACGCCGCCATCGAGACCTACAACCTGCTCTC 9105830 Query 7644 TTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCGCCTCA 7703 ||| ||| || ||||| || || || | || ||| || || ||| |||||| Sbjct 9105831 AGAGAAGTGGTTCACCCACGCGTCTCCTACGCTCTTCAACGCAGGAACCAACAGGCCTCA 9105890 Query 7704 ATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACAC 7763 ||||| || || |||| |||||| || |||||||||||||||||||| |||| Sbjct 9105891 GCTGTCCAGCTGCTTCCTGCTCACCATGAAGGATGACAGCATCGACGGCATTTATGACAC 9105950 Query 7764 GCTGCGCGATTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAACGA 7823 |||| | || ||| || ||||| | | || ||||| || || || | | Sbjct 9105951 GCTGAAGCAGTGTGCCCTCATCTCCAAGTCAGCTGGAGGAATCGGCGTGGCGGTCAGCTG 9106010 Query 7824 CGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCC 7883 | | | | | || ||| ||| | ||||||||| || | | ||| | | || Sbjct 9106011 CATCAGATCAACGGGGAGCTACATTGCTGGCACCAACGGCAACTCAAACGGGCTGGTCCC 9106070 Query 7884 CATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGG---AAAGCGCAA 7940 |||| || | || | ||| ||| ||| ||| |||| |||||||| || ||| | Sbjct 9106071 CATGCTGAGAGTCTACAACAACACGGCGCGCTATGTCGACCAGGGCGGCAACAAGAGACC 9106130 Query 7941 AGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGACATTTACGCAGTGCTAAATCT 8000 || ||| ||||| || ||||||| |||||| ||| | | | | || | || Sbjct 9106131 CGGGGCCTTCGCCATGTACCTGGAGCCATGGCACTTTGACGTGTTTGACTTCCTGGAGCT 9106190 Query 8001 GCGTCGCAACATGGGTTGCGAAGACAGCAAAGCGC--GCGATCTATTCTTCGGATTGTGG 8058 | |||| || || | ||||||| || | ||||| |||| ||| |||||| Sbjct 9106191 GAAGAAGAACACAGGGAAGGAGG--AGCAAAGAGCCAGAGATCTTTTCTACGGCTTGTGG 9106248 Query 8059 GTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGCACAATGGTCGCTCATGTGCCCC 8118 | ||||| |||| |||| | | || | | || | ||||| || ||||| ||| Sbjct 9106249 ATCCCCGACTTGTTCATGAAGAGAGTCGAGAGCAACCAGGACTGGTCTCTGATGTGTCCC 9106308 Query 8119 GATCG-TTGCCCTTTATTAAAAAACGTTTACGGTTCAAAATTTGAACAATTGTACAAACA 8177 | || ||||| | | | | || | ||||| | | |||| || Sbjct 9106309 -AGCGAGTGCCCCGGGCTGGACGAGTGCTGGGGGGAGGAGTTTGAGAAGCTCTACACCCA 9106367 Query 8178 ATACGAACACGA-CGGCGCGTACGTGCGGCAAGTGAAAGCGCGCGACCTGCACCGCGCCA 8236 || || | || |||| || | ||| ||||| || | | ||| | |||| Sbjct 9106368 GTATGAGAAGGAGGGGCGGGT-CAAGCGTGTTGTGAAGGCTCAGCAGCTGTGGCACGCCG 9106426 Query 8237 TTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGCAACG 8296 | ||||| | || | || || |||| ||||||||||||||||||||||| |||||| Sbjct 9106427 TCATCGAGTCCCAGACGGAGACGGGTACACCGTACATGCTGTACAAAGACGCCTGCAACA 9106486 Query 8297 CCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAAATTG 8356 || ||||| ||| || | |||||||| |||||||| || ||| | ||||| | Sbjct 9106487 GGAAGAGCAACCAACAGAATCTTGGCACCATCAAATGCAGCAACCTCTGCACCGAAATCG 9106546 Query 8357 TACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTCGGTGTGTTTAAACG 8416 | | |||| | ||| || || ||||| || ||||| || || | | | ||| Sbjct 9106547 TTGAATACACCAGTGACGATGAGGTCGCCGTCTGTAATCTGGCCTCCATCGCTCTCAACA 9106606 Query 8417 CGTTCGTTGATCGACGCTCAAAC--ACTTACGACTTTGAACAATTGAAAAACGCCGTG-- 8472 || ||| || | | | | |||| ||||| || || || | | ||| Sbjct 9106607 TGTACGT-----CACCCCCGAGCGGACTTTTGACTTCAAAAAACTG---GAGTCTGTGAC 9106658 Query 8473 -CAAGTGACGGTACGCAATTTAGATCGCATCATTGATGTCAATTTTTATCCCTTGGAAGA 8531 |||| | || || | | ||||| || | || | || || || || Sbjct 9106659 CAAAGTTATCGTCAAGAACCTGAACAAGATCATAGAGATTAACTACTACCCAGTGCCCGA 9106718 Query 8532 AGCGCGCGTATCGAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTGGCCGA 8591 || || |||| ||||||||| || |||| | ||||| || ||| ||||||| Sbjct 9106719 GGCTGATAAGTCCAACAAGCGCCACAGGCCAATTGGAATCGGCGTCCAGGGTTTGGCCGA 9106778 Query 8592 CGCGTTTGCCATGTTGCGCCTCCCCTACGAAAGCCAAGAAGCGCGCATGCTCAACATAAA 8651 ||| || | || |||| ||||| ||||||| ||| || | |||| ||||| | Sbjct 9106779 CGCCTTCATCCTGATGCGTTACCCCTTTGAAAGCCCAGAGGCTCAGCTGCTGAACATCCA 9106838 Query 8652 AATAGCGGAAACGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGC--CCGAGAA 8709 || || || | || |||| ||| | || || ||||| | || || ||||| Sbjct 9106839 GATCTTTGAGACCATCTACTACGCCGCCCTGGAGGCGAGCTGCGAGCTGGCAGCCGAG-- 9106896 Query 8710 TTGGGCACGTACGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAATACGAC 8769 |||||| | ||||| | |||| ||| | |||| |||| || || | || |||||| Sbjct 9106897 TTGGGCCCCTACGAGACATACGAAGGCTGTCCTGTCAGCAAGGGCATCCTCCAGTACGAC 9106956 Query 8770 ATGTGGAATGTCACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGCAAAATTGCT 8829 |||||| | ||||||||| ||||| | |||| |||| || || || Sbjct 9106957 ATGTGGGAGAAGACGCCCACCGACCTGTGGGACTGGAAGCTGCTGAAGGAAAAGATCGCC 9107016 Query 8830 CAATTCGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTCAA 8889 | ||| || | || ||| || |||| |||||||| ||| | || || || Sbjct 9107017 AAGCACGGCGTGAGGAACAGCCTGCTGCTGGCCCCGATGCCCACGGCCTCCACCGCCCAG 9107076 Query 8890 ATAATGGGAAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTAC 8937 || |||| |||||||| ||| | ||| | | ||||| |||| | ||| Sbjct 9107077 ATCCTGGGCAACAACGAGTCCATCGAGGCCTACACCAGCAACATCTAC 9107124 >seq7 Length=16146599 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 |||||||| || ||||| || || || || ||||| || || || |||||||||||| Sbjct 1869769 CCTCCTCTCAGACGCAAGACCAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAG 1869710 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| || ||||| ||||| || || || | ||||||||| || || || Sbjct 1869709 AGAGTGCGGCCGTCTTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGG 1869650 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| ||||| || || ||||| || || || | ||||| | || || Sbjct 1869649 ATGCCCTCTTTGTCCTGGATTTTGGCCTTAACATTTTCAATGGTGTCACTGGGCTCGACC 1869590 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || ||||| | ||||| || || || ||||| Sbjct 1869589 TCCAGGGTGATGGTCTTGCCGGTCAGGGTTTTCACAAAGATCTGCAT 1869543 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543 ||||||||||| || || | || || || || ||||| || ||||| || ||||||||| Sbjct 1870000 TTTCCTCCTCTCAGACGGAGGACAAGATGGAGGGTGGACTCTTTTTGGATATTGTAGTCG 1869941 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 | |||| | || || ||||| ||||| || || |||| | |||||| || || Sbjct 1869940 GACAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGA 1869881 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || |||||||| || || || || || |||||| || | |||||| | || Sbjct 1869880 GGGATGCCTTCCTTATCCTGGATCTTAGCTTTGACATTCTCAATGGTGTCGCTGGGCTCG 1869821 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || ||||| ||||| || || || | || || || || || ||||| Sbjct 1869820 ACCTCCAGAGTGATGGTCTTGCCTGTGAGGGTCTTCACAAAGATCTGCAT 1869771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505338226003000