Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq14 455 4e-123 seq11 100 4e-16 >seq14 Length=13523219 Score = 455 bits (504), Expect = 4e-123 Identities = 1273/1941 (66%), Gaps = 17/1941 (1%) Strand=Plus/Minus Query 68653 TTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTA 68712 || || ||||| || |||||| | ||||||||| | || | || ||||| || || Sbjct 9107219 TTTTTCATCTCCTCGCTCCACAGTCCTCTCTCCGTCAGGTCTTTGAGCAGATGAGGGTTG 9107160 Query 68713 ACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCC 68772 || || ||||| || || || | || || || ||||| || || ||||| || | || Sbjct 9107159 ACGATCTGAAACTCTCCGGACAGGACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCCTCG 9107100 Query 68773 ACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAAT 68832 | || || || || ||||| || || || || || || || ||||| || |||| || Sbjct 9107099 ATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGCATCGGGGCCAGCAGC 9107040 Query 68833 AAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGA 68892 | || || || | || || | ||| || || || || | ||||| ||||| || Sbjct 9107039 AGGCTGTTCCTCACGCCGTGCTTGGCGATCTTTTCCTTCAGCAGCTTCCAGTCCCACAGG 9106980 Query 68893 TCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCA 68952 || | || | ||| | ||||| || || || || || || || | || Sbjct 9106979 TCGGTGGGCGTCTTCTCCCACATGTCGTACTGGAGGATGCCCTTGCTGACAGGACAGCCT 9106920 Query 68953 TTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCG 69012 | ||||| || || || || || | || || || || || ||||| | || || Sbjct 9106919 TCGTATGTCTCGTAGGGGCCCAACTCGGCTGCCAGCTCGCAGCTCGCCTCCAGGGCGGCG 9106860 Query 69013 TAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGA 69072 || || || || || || |||| | || || || || ||| | || || || || Sbjct 9106859 TAGTAGATGGTCTCAAAGATCTGGATGTTCAGCAGCTGAGCCTCTGGGCTTTCAAAGGGG 9106800 Query 69073 TAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGT 69132 ||| | | || || || || || ||||| ||||| || || || || || || || || Sbjct 9106799 TAACGCATCAGGATGAAGGCGTCGGCCAAACCCTGGACGCCGATTCCAATTGGCCTGTGG 9106740 Query 69133 CTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTA 69192 | ||| || || | ||||| || || | || || || ||||| ||||| || || || Sbjct 9106739 CGCTTGTTGGACTTATCAGCCTCGGGCACTGGGTAGTAGTTAATCTCTATGATCTTGTTC 9106680 Query 69193 AGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCCA-TC 69251 || || ||| | ||||| ||| || ||||| || ||||| |||| || Sbjct 9106679 AGGTTCTTGACGATAACTTTGGTCACAGACTCCAGTTTTTTGAAGTCAAAA-GTCCGCTC 9106621 Query 69252 TA---TAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGA 69308 | || |||| || || || | || || |||||||| || || ||||||| Sbjct 9106620 GGGGGTGACGTACATGTTGAGAGCGATGGAGGCCAGATTACAGACGGCGACCTCATCGTC 9106561 Query 69309 ATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTG 69368 | | | |||| | || || || || || || || |||||||| || || ||||| || Sbjct 9106560 ACTGGTGTATTCAACGATTTCGGTGCAGAGGTTGCTGCATTTGATGGTGCCAAGATTCTG 9106501 Query 69369 CTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAAT 69428 || || ||||| |||| |||||||| ||||| || || |||| ||||| || || | Sbjct 9106500 TTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTACGGTGTACCCGTCTCCGT 9106441 Query 69429 CTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGCTT 69488 ||| || ||||| | | | ||| | | ||| || | || |||| ||| Sbjct 9106440 CTGGGACTCGATGACGGCGTGCCACAGCTGCTGAGCCTTCACAACACGCTTGACCCGCCC 9106381 Query 69489 CTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCC 69548 ||| || ||||| || || || ||| || || || || ||||| || |||| || Sbjct 9106380 CTCCTTCTCATACTGGGTGTAGAGCTTCTCAAACTCCTCCCCCCAGCACTCGTCCAGCCC 9106321 Query 69549 AGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAA 69608 || || || | |||||||||| ||||| | | | || |||| ||||| || Sbjct 9106320 GGGGCACTCGCTGGGACACATCAGAGACCAGTCCTGGTTGCTCTCGACTCTCTTCATGAA 9106261 Query 69609 TAGATCGGGAATCCAAAGAGCTATA-AAGAGATCTCTGGTTCTATTTTCTTCATTTCCTG 69667 | ||||| ||||| | ||| || || |||||||||| ||| | || || || |||| Sbjct 9106260 CAAGTCGGGGATCCACA-AGCCGTAGAAAAGATCTCTGGCTCTTTGCTCCTCCTTCCCTG 9106202 Query 69668 TAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCG 69727 | || || || || || || || || | | ||| | |||||||| || || || || | Sbjct 9106201 TGTTCTTCTTCAGCTCCAGGAAGTCAAACACGTCAAAGTGCCATGGCTCCAGGTACATGG 9106142 Query 69728 CCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGA 69787 | | | | || |||| || || || ||||| || | || | || ||||| || |||| Sbjct 9106141 CGAAGGCCCCGGGTCTCTTGTTGCCGCCCTGGTCGACATAGCGCGCCGTGTTGTTGTAGA 9106082 Query 69788 CTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTC 69847 |||||||||| || | | || || || || || || || |||| ||| || || || Sbjct 9106081 CTCTCAGCATGGGGACCAGCCCGTTTGAGTTGCCGTTGGTGCCAGCAATGTAGCTCCCCG 9106022 Query 69848 TTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCAC 69907 ||| | || || | | | || |||||||| || || ||||| || |||| Sbjct 9106021 TTGATCTGATGCAGCTGACCGCCACGCCGATTCCTCCAGCTGACTTGGAGATGAGGGCAC 9105962 Query 69908 AACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAAC 69967 | | |||| |||||||| || || || ||||| ||||| ||||| | || || || | Sbjct 9105961 ACTGCTTCAGCGTGTCATAAATGCCGTCGATGCTGTCATCCTTCATGGTGAGCAGGAAGC 9105902 Query 69968 AGCTAGACATTTGATG-ATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTG 70026 |||| |||| ||| | ||| | ||||| || || || | |||||||| ||||| ||| Sbjct 9105901 AGCTGGACAGCTGAGGCCTGT-TGGTTCCTGCGTTGAAGAGCGTAGGAGACGCGTGGGTG 9105843 Query 70027 AACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCACTGATGA 70086 ||||| || || || ||||| ||||| || || || || | || ||| | | || Sbjct 9105842 AACCACTTCTCTGAGAGCAGGTTGTAGGTCTCGATGGCGGCGTCGATAGCTGTTTTGTGG 9105783 Query 70087 ATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATT 70146 || || | || || | ||| | ||| ||||| || || || || ||| || || Sbjct 9105782 ATACCAACAGCCACTCTCATGAGCATGTGCTGCGGCCGCTCGGCCACTTTGCCGTTGATC 9105723 Query 70147 TTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTT 70206 |||| || ||| || |||||||| || || ||||| ||||||| || || ||||| Sbjct 9105722 TTCAGCAAGTAGGAACGCTCCAGAGTCTTGAAGCCAAAGAAGTTGTAGGAGAAATCTCTG 9105663 Query 70207 TCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATATCCA---TAACA 70263 ||| |||| || | || || || || || | || ||| || || | | | Sbjct 9105662 TCGAAAATGATGGCCGAGTTGAGGCGGTCTTTGTTTTCAAGAACGATGTCGAGGGTCTCC 9105603 Query 70264 GTAGGTGAGATAATCGGAGATCGTTTACCATTTTTAGGATTAACATAGTTGAATAAATCT 70323 | ||||| || || || | | ||| ||| || || |||||||| | || Sbjct 9105602 TT---GGAGATCATAGGGGAGTGGCGTCTATTCAGAGGGTTGACGTAGTTGAACAGGTCC 9105546 Query 70324 TCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTG 70383 ||||| || ||||| || | ||| ||||| |||||||| | || || | ||| || | Sbjct 9105545 TCCATCACCTCACTGAACACTTTCTTTGTCTCCTTGTGCAGGTTGGAGACGGCGATCCGT 9105486 Query 70384 GCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCT 70443 || || || || |||||||| || |||| || || || || || || || ||||| Sbjct 9105485 GCAGCGAGGATGGCATAGTCTGGGTGTTTGGTCGTGAGGGTGGCAGCGATCTCTGCAGCC 9105426 Query 70444 AACGTATCTAATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGGCT 70503 | || || | || | || || || || | || || || || || || ||||| | Sbjct 9105425 AGAGTGTCGAGCTCCACTGTGGTGACACCACTGTACAGACCCTGGATCACCTTCATTGTG 9105366 Query 70504 ATTTTGATAGGATCTATGAATTCTGTGTTCAGACCATAACATAATTTTCT-AATACGAGA 70562 || | | ||||| | ||| || | |||||| ||||| || || |||| |||||||| Sbjct 9105365 ATCTGAGTTGGATCCACGAAGTCAGAGTTCAGCCCATAGCA-AAGCTTCTGGATACGAGA 9105307 Query 70563 TGTAATTTTATCAAACATAAC 70583 || |||||||| ||||| || Sbjct 9105306 GGTGATTTTATCGAACATGAC 9105286 Score = 96.9 bits (106), Expect = 5e-15 Identities = 124/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 68441 TCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATAT 68500 |||| |||||||| ||||| || || |||||| || |||| || || || || || | Sbjct 9107627 TCCAGCCGTAGAAGTGCATGCTGGTCAGTTTGCCGTAGTTTGGCTCAGCGATGTGGATGT 9107568 Query 68501 TCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCT 68560 |||| || || || || |||||| | || |||| || || ||||| || | || ||| Sbjct 9107567 TCATGGACTGGCTCTGGTCGATGTAGGCGCCTCGGTCAGCAGCCATCTTCAGTATGGTCT 9107508 Query 68561 TTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAA 68611 | || | |||||||| | || ||| ||| ||| || | ||||||||||| Sbjct 9107507 TCTGGGAGATTTCCCACACGGTTTTATAAAGCTGCTTCAGATCATCTGGAA 9107457 >seq11 Length=13916851 Score = 100 bits (110), Expect = 4e-16 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 69324 TATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTT 69383 ||||||||| || ||||| || ||||||| || |||||||| ||||| || ||||| | Sbjct 4879581 TATCTCTGTGCACAGATTGCTGGATTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCT 4879522 Query 69384 GTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAAT 69443 ||| |||||||||||||| || || | || || || ||||| |||| || ||||| || Sbjct 4879521 GTTGCAGGCGTCCTTGTAGAGCATGTATGGTGTTCCCGTTTCTGTCTGTGACTCGATGAT 4879462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686827014921000