Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq14 176 6e-39 seq11 96.9 4e-15 >seq14 Length=13523219 Score = 176 bits (194), Expect = 6e-39 Identities = 895/1401 (64%), Gaps = 48/1401 (3%) Strand=Plus/Minus Query 110615 TTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACA 110674 ||||| |||| | ||| || || ||| | | ||||| |||| || || |||||| Sbjct 9107216 TTCATCTCCTCGCTCCACAGTCCTCTCTCCGTCAGGTCTTTGAGCAGATGAGGGTTGACG 9107157 Query 110675 ATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAG 110734 || |||||| || | ||| || | ||||||||| | ||||| | || | | Sbjct 9107156 ATCTGAAACTCTCCGGACAGGACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCCTCGATG 9107097 Query 110735 CATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGA 110794 | || || || |||| ||| || ||||||||||| || ||||| || |||| || || Sbjct 9107096 GACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGCATCGGGGCCAGCAGCAGG 9107037 Query 110795 CTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGA-G 110853 ||||| | | || | || ||| |||||| || | | |||||| | | | Sbjct 9107036 CTGTTCCTCACGCCGTGCTTGGCGATCTTTTCCTTCAGCAGCTTCCAGTCCCACAGGTCG 9106977 Query 110854 CTTGGTTTCACCTTCCCACATGTCAAACTGAAGCAC-CCCTTGG-GACGCGGGAGAACCC 110911 | || || || |||||||||| |||| || | |||||| ||| ||| | || Sbjct 9106976 GTGGGCGTCTTCT-CCCACATGTCGTACTGGAGGATGCCCTTGCTGACA--GGACAGCCT 9106920 Query 110912 TCAAAGGTTTCATAGGAACCT---TGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGAT 110968 || | || || |||| || | |||| |||| || |||||||||||||||| Sbjct 9106919 TCGTATGTCTCGTAGGGGCCCAACTCGGCT---GCCAGCTCGCAGCTCGCCTCCAGGGCG 9106863 Query 110969 GCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAAT 111028 |||| || ||||| |||||||| | |||| | || || || ||||| Sbjct 9106862 GCGTAGTAGATGGTCTCAAAGATCTGGATGTTCAGCAGCTGAGCCTCTGGGCTTTCAAAG 9106803 Query 111029 GCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTG 111088 | ||| || || || || | || || | ||| || || || | ||||| || ||| Sbjct 9106802 GGGTAACGCATCAGGATGAAGGCGTCGGCCAAACCCTGGACGCCGATTCCAATTGGCCTG 9106743 Query 111089 TGTCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACT 111145 || ||| | || ||||| ||| ||| || || || | || | || |||| Sbjct 9106742 TGGCGCTTGTTGGACTTAT---CAGCCTCGGGCACTGGGTAGTAGTTAATCTCTATGATC 9106686 Query 111146 CGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTG 111205 ||| || || ||| | || || || | | ||||||| | |||||||| Sbjct 9106685 TTGTTCAGGTTCTTGACGATAACTTTGGTCACAGACTCCAGTTTTTTGAAGTCAAAAGTC 9106626 Query 111206 CGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTC 111265 || ||| |||| ||| | || ||||| || |||| ||| || || || | Sbjct 9106625 CG---CTCGGGGGTGACGTACATGTTGAGAGCGATGGAGGCCAGATTACAGACGGCGACC 9106569 Query 111266 TCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCC 111325 ||||| | | ||||| || | ||||| || || | |||| | || || || || Sbjct 9106568 TCATCGTCACTGGTGTATTCAACGATTTCGGTGCAGAGGTTGCTGCATTTGATGGTGCCA 9106509 Query 111326 AAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCC 111385 | ||||| |||||| |||||| ||||||| || || ||||| |||||||| || || ||| Sbjct 9106508 AGATTCTGTTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTACGGTGTACCC 9106449 Query 111386 GTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTT 111444 ||||||||||| || | || | || | ||| | | | | | || |||| || Sbjct 9106448 GTCTCCGTCTGGGACTCGATGACGGCGTGCCACAGCTGCTGAGCCT-TCACAACACGCTT 9106390 Query 111445 GGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGC-GT 111503 | |||| |||||| ||| |||| |||||||| ||||||||||| ||| | || | Sbjct 9106389 GACCCGCCCCTCCTTCTCATACTGGGTGTAGAGCTTCTCAAACTCCTC-CCCCCAGCACT 9106331 Query 111504 CGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTT--CCTCAAC 111561 || || || || || | ||||| | |||||||| | || || ||| || Sbjct 9106330 CGTCCAGCCCGGGGCACTCGCTGGGACACATCAGAGACCA--GTCCTGGTTGCTCTCGAC 9106273 Query 111562 CCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTC 111621 | ||||||||| | ||| || ||||||| | | || |||||||| | ||| Sbjct 9106272 TCTCTTCATGAACAAGTCGGGGATCCACAAGCCGTAGAAAAGATCTCTGGCTCTTTGCTC 9106213 Query 111622 TTCGTCACCTTGGTTGAGTCGT-AACTCAAGGAACTCCATGATATCCGCGTGCCATGGCT 111680 || | ||| ||| || | | ||| ||||| || | | || ||||||||||| Sbjct 9106212 CTCCTTCCCTGTGTT-CTTCTTCAGCTCCAGGAAGTCAAACACGTCAAAGTGCCATGGCT 9106154 Query 111681 CAAGATAGACTGCGA------TAGATCCCTT-TCGACGCCCAGCTTGATTTACATAGCGC 111733 | || || | |||| | || ||| | | ||||| || | ||||||||| Sbjct 9106153 CCAGGTACATGGCGAAGGCCCCGGGTCTCTTGTTGCCGCCC----TGGTCGACATAGCGC 9106098 Query 111734 GCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCC 111793 || ||| ||| | || | ||||| || | | || | ||| | || || || || Sbjct 9106097 GCCGTGTTGTTGTAGACTCTCAGCATGGGGACCAGCCCGTTTGAGTTGCCGTTGGTGCCA 9106038 Query 111794 CGAATACGAGAT-TTATTGGCTCTCA--CATCATGGATGTGCATCCCAATACCCCCAGCC 111850 ||| || | | | ||| | || | || || || || || ||||| Sbjct 9106037 GCAAT-GTAGCTCCCCGTTGATCTGATGCAGC--TGACCGCCACGCCGATTCCTCCAGCT 9105981 Query 111851 CACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCC 111910 |||| ||||| | ||||||| | | || || |||| || |||| ||| ||| ||| Sbjct 9105980 GACTTGGAGATGAGGGCACACTGCTTCAGCGTGTCATAAATGCCGTCGATGCTGTCATCC 9105921 Query 111911 TTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGG 111970 || ||| || |||||||| ||||||| ||| || || || || || |||||||| Sbjct 9105920 TTCATGGTGAGCAGGAAGCAGCTGGACAGCTGAGGCCTGTTGGTTCCTGCGTTGAAGAGC 9105861 Query 111971 GTTGGTGTTGCGTGAATGAAC 111991 || || | ||||| ||||| Sbjct 9105860 GTAGGAGACGCGTGGGTGAAC 9105840 >seq11 Length=13916851 Score = 96.9 bits (106), Expect = 4e-15 Identities = 113/153 (74%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 111265 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCC 111324 |||||| || ||||||||| | || ||||| || | ||| || || || || Sbjct 4879605 CTCATCTTTGCTTGTGTACTCCACTATCTCTGTGCACAGATTGCTGGATTTGATGGTGCC 4879546 Query 111325 CAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 111384 || ||||| ||||| |||||| ||||||| || ||||||||||||||||| || || || Sbjct 4879545 CAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTATGGTGTTCC 4879486 Query 111385 CGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA 111417 ||| || |||||||| | || || || | ||| Sbjct 4879485 CGTTTCTGTCTGTGACTCGATGATGGCATGCCA 4879453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627957224940000