Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq14 203 4e-47 seq6597 93.3 5e-14 >seq14 Length=13523219 Score = 203 bits (224), Expect = 4e-47 Identities = 863/1344 (64%), Gaps = 42/1344 (3%) Strand=Plus/Minus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 ||||| ||| | ||||| | ||| | | |||| ||||| |||| ||| ||||| |||||| Sbjct 9107123 TAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAG 9107064 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301 || |||||||| || |||| || |||||||| | | || | | || |||| Sbjct 9107063 GCCGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGCCGTGCTTGGCGATCTTTTCC 9107004 Query 118302 TTGAG-AGC-----GTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAAC 118355 || || ||| |||||| || | || || | |||||| |||| || || Sbjct 9107003 TTCAGCAGCTTCCAGTCCCACAGGTCGGTGGGCGTCTTCTCCC------ACATGTCGTAC 9106950 Query 118356 TGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC 118415 |||||||| || | | | || | || || ||||||| || |||||| | | Sbjct 9106949 TGGAGGATGCCCTTGCTGACAGGACAGCCTTCGTATGTCTCGTAGGGGCCCAACTCGGCT 9106890 Query 118416 GCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTC 118475 |||| ||| |||||||||| ||||| |||| || || || ||||| || | ||| Sbjct 9106889 GCCAGCTCGCAGCTCGCCTCCAGGGCGGCGTAGTAGATGGTCTCAAAGATCTGGATGTTC 9106830 Query 118476 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGA 118535 | || ||||| | ||||| | | || || || || | || || | | Sbjct 9106829 AGCAGCTGAGCCTCTGGGCTTTCAAAGGGGTAACGCATCAGGATGAAGGCGTCGGCCAAA 9106770 Query 118536 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTC---C 118592 || ||||| |||| |||||||| | || | | | || ||||| ||| ||| | Sbjct 9106769 CCCTGGACGCCGATTCCAATTGGCCTGTGGCGCTTGTTGGACTTATCAGC---CTCGGGC 9106713 Query 118593 ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATT 118652 || || || | || | || || | | | || || || ||| || ||| || || | Sbjct 9106712 ACTGGGTAGTAGTTAATCTCTATGATCTTGTTCAGGTTCTTGACGATAACTTTGGTCACA 9106653 Query 118653 TCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCG 118712 | || |||| | | |||||| | || ||| |||| ||| | || ||| Sbjct 9106652 GACTCCAGTTTTTTGAAGTCAAAAGTCCG---CTCGGGGGTGACGTACATGTTGAGAGCG 9106596 Query 118713 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTG 118772 || || ||||||||||| || | | |||||| | | ||||| || | ||||| ||| Sbjct 9106595 ATGGAGGCCAGATTACAGACGGCGACCTCATCGTCACTGGTGTATTCAACGATTTCGGTG 9106536 Query 118773 CACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 118832 || | ||| | || |||||||| | |||| ||| || ||| |||| || || Sbjct 9106535 CAGAGGTTGCTGCATTTGATGGTGCCAAGATTCTGTTGGTTGCTCTTCCTGTTGCAGGCG 9106476 Query 118833 TCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAG 118892 || ||||| |||||||| || || ||||||||||| ||||||| || | || | || Sbjct 9106475 TCTTTGTACAGCATGTACGGTGTACCCGTCTCCGTCTGGGACTCGATGACGGCGTGCC-- 9106418 Query 118893 ACATCGGC--AGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGA 118950 ||| | || ||| |||| ||| | |||||||| | ||| |||| ||||||| Sbjct 9106417 ACAGCTGCTGAGCCTTCACAACACGCTTGACCCGCCCCTCCTTCTCATACTGGGTGTAGA 9106358 Query 118951 GGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG-CAGAAG 119009 | |||||||| || ||| | ||| ||||| || || | ||||| || | Sbjct 9106357 GCTTCTCAAACTCCTCCCCCCAGCACTCGTCCAGCCC-GGGGCACTCGCTGGGACACATC 9106299 Query 119010 AGAGACCATTGACCACCCT--CCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCG 119067 |||||||| | || | ||| || | ||||||||| | ||| |||||||| | | Sbjct 9106298 AGAGACCA--GTCCTGGTTGCTCTCGACTCTCTTCATGAACAAGTCGGGGATCCACA-AG 9106242 Query 119068 CCG-AGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAA 119125 ||| |||| ||||| | | | ||| || | |||| || || || ||||| Sbjct 9106241 CCGTAGAAAAGATCTCTGGCTCTTTGCTCCTCCTTCCCTGTG-TTCTTCTTCAGCTCCAG 9106183 Query 119126 AAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC----CTTAC 119181 ||||| | | || |||||| || |||||||||| |||| | ||| || Sbjct 9106182 GAAGTCAAACACGTCAAAGTGCCATGGCTCCAGGTACATGGCGAAGGCCCCGGGTCTCTT 9106123 Query 119182 GACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGA 119241 | | || |||||| ||||| | ||| ||| ||| | || | ||||| || | | Sbjct 9106122 GTTG-CCGCCCTGGTCGACATAGCGCGCCGTGTTGTTGTAGACTCTCAGCATGGGGACCA 9106064 Query 119242 TACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGA 119301 || | || | ||| || || || ||| | | | ||||| | || Sbjct 9106063 GCCCGTTTGAGTTGCCGTTGGTGCCAGCAATGTAGCTCCCCGTTGATCTGATGCAGCTGA 9106004 Query 119302 TGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGT 119361 || || || || || || |||| ||||| | || |||| | | || || | | Sbjct 9106003 CCGCCACGCCGATTCCTCCAGCTGACTTGGAGATGAGGGCACACTGCTTCAGCGTGTCAT 9105944 Query 119362 AGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCC 119421 | || || ||||| |||| |||| | | || ||||||||||| |||| ||||||| Sbjct 9105943 AAATGCCGTCGATGCTGTCATCCTTCATGGTGAGCAGGAAGCAGCTGGACAGCTGAGGCC 9105884 Query 119422 TGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATC 119480 || || || ||||||||||| || || | ||||||| ||||| || | | || | | Sbjct 9105883 TGTTGGTTCCTGCGTTGAAGAGCGTAGGAGACGCGTGGGTGAAC-CACTTCTCTGAGAGC 9105825 Query 119481 TTGTCGTAGGTCTCCAAGACGGCG 119504 || ||||||||| | | ||||| Sbjct 9105824 AGGTTGTAGGTCTCGATGGCGGCG 9105801 >seq6597 Length=1954 Score = 93.3 bits (102), Expect = 5e-14 Identities = 93/121 (77%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 130035 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 130094 |||| || | | |||||| || || |||||| ||| || ||||||||||| | ||||| Sbjct 225 CCTCATCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATGAGACCTCTCTTCT 284 Query 130095 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACG 130154 ||| |||||| || | | || || |||||||||||||| |||||||| |||||| | Sbjct 285 TCAGCCAGAAGATGGAAGCGAACGAACCAGAGAAGAAGATTCCCTCCACTGCCGCGAAGG 344 Query 130155 C 130155 | Sbjct 345 C 345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618361567559000