Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq13 161 8e-35 seq22 109 4e-19 >seq13 Length=13670824 Score = 161 bits (178), Expect = 8e-35 Identities = 142/177 (80%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 29942 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 30001 || || |||| |||||| |||||||| ||||| || | |||||||||||| || || || Sbjct 11903247 AGTCCCGTGATGTGAGCGATCATGTAGGTGAGAAGTGCGTAGCTGGCGATATTGAAAGGG 11903188 Query 30002 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 30061 || || || ||||| || ||||| | |||||| ||||||||||| ||||| || ||| || Sbjct 11903187 ACGCCCAGACCCATATCACCCGAGCGCTGGTACAGCTGACACGACAGCTCGCCATCGATC 11903128 Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTG 30118 ||||| ||||| || | ||||||||| || || |||||||||||| || |||| || Sbjct 11903127 ACGTAGAACTGGCAGAGGGCGTGGCAGGGGGGCAGAGCCATGAGGGGCAGGTCTGTG 11903071 Score = 141 bits (156), Expect = 8e-29 Identities = 128/161 (80%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 30230 GTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCT 30289 ||||| ||||| || || |||||||||||||| |||||||| ||||||||||| |||||| Sbjct 11902520 GTGTATTCTGCACCAAAGTGCCTCCACTGGAAACCGTACACGGGTCCCAGGTCGCCCTCT 11902461 Query 30290 TCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATC 30349 || || | | ||| || || |||| || | || || |||||||| ||||||||| Sbjct 11902460 TCTCTTTCCGTGAACCCGAGATTATCCAGGAACTGTCGAGACCCGTTGGCTTCCCAGATC 11902401 Query 30350 TTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCC 30390 || ||||| ||||| |||||||| |||| ||| || ||||| Sbjct 11902400 TTCACCCCTTTCTCTGAGAGCTCCTTGGCGTTGGTTGACCC 11902360 >seq22 Length=10337708 Score = 109 bits (120), Expect = 4e-19 Identities = 86/103 (83%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 110406 CTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGA 110465 || |||||||||||| | ||| ||||||| |||||||||| ||||| || |||||||| Sbjct 10258028 CTGCCTGCTGAGGACGATGTTGATCCTGTTGTTCAGAGGTCTGTTCTTCTCTGGGATGGA 10258087 Query 110466 GAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 110508 |||||| ||||| || ||||| |||||||| ||||| || ||| Sbjct 10258088 GAACCACGTCTTCCTGCCCATGATCACCACATTCTGTTTACCT 10258130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406263233076300