Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq13 129 5e-25 >seq13 Length=13670824 Score = 129 bits (142), Expect = 5e-25 Identities = 125/161 (78%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624 || || || || ||||| || ||||| |||||| |||||||||| |||||||| || Sbjct 11903075 GACCTGCCCCTCATGGCTCTGCCCCCCTGCCACGCCCTCTGCCAGTTCTACGTGATCGAT 11903134 Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684 || |||||||| || ||||| || || || ||||| || ||||| | || || || ||| Sbjct 11903135 GGCGAGCTGTCGTGTCAGCTGTACCAGCGCTCGGGTGATATGGGTCTGGGCGTCCCTTTC 11903194 Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725 || || || || ||||| || ||||| |||||||||||||| Sbjct 11903195 AATATCGCCAGCTACGCACTTCTCACCTACATGATCGCTCA 11903235 Score = 129 bits (142), Expect = 5e-25 Identities = 125/161 (78%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 |||||||||||||| ||||| || ||||| || || || ||||| || || || | ||| Sbjct 11903235 TGAGCGATCATGTAGGTGAGAAGTGCGTAGCTGGCGATATTGAAAGGGACGCCCAGACCC 11903176 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 || || ||||| || || || ||||| || |||||||| |||| |||||||| ||| Sbjct 11903175 ATATCACCCGAGCGCTGGTACAGCTGACACGACAGCTCGCCATCGATCACGTAGAACTGG 11903116 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780 ||||||| |||||| ||||| || ||||| || || || || Sbjct 11903115 CAGAGGGCGTGGCAGGGGGGCAGAGCCATGAGGGGCAGGTC 11903075 Score = 116 bits (128), Expect = 3e-21 Identities = 121/159 (76%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 34288 GGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGG 34347 |||| | || ||| ||||||||||||| ||||||||||||||||| || |||| Sbjct 11902359 GGGGTCAACCAACGCCAAGGAGCTCTCAGAGAAAGGGGTGAAGATCTGGGAAGCCAACGG 11902418 Query 34348 GTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCC 34407 ||||||| | || ||||| || | |||||| | | || ||||||||| |||| || Sbjct 11902419 GTCTCGACAGTTCCTGGATAATCTCGGGTTCACGGAAAGAGAAGAGGGCGACCTGGGACC 11902478 Query 34408 GGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446 || ||||| ||||||||||| |||||||| || || || Sbjct 11902479 CGTGTACGGTTTCCAGTGGAGGCACTTTGGTGCAGAATA 11902517 Score = 116 bits (128), Expect = 3e-21 Identities = 121/159 (76%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 || || || |||||||| ||||||||||| ||||| || || |||| ||||||||| || Sbjct 11902517 TATTCTGCACCAAAGTGCCTCCACTGGAAACCGTACACGGGTCCCAGGTCGCCCTCTTCT 11902458 Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018 | | |||||| | || ||||| || | ||||||||||| || |||||||||||| Sbjct 11902457 CTTTCCGTGAACCCGAGATTATCCAGGAACTGTCGAGACCCGTTGGCTTCCCAGATCTTC 11902398 Query 7019 ACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCC 7057 ||||| ||||||||||||| ||| || | |||| Sbjct 11902397 ACCCCTTTCTCTGAGAGCTCCTTGGCGTTGGTTGACCCC 11902359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448209028758000