Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq7 129 4e-25 >seq7 Length=16146599 Score = 129 bits (142), Expect = 4e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || |||||||| || || || || ||||| || || || || ||| Sbjct 1869543 ATGCAGATCTTTGTGAAAACCCTGACCGGCAAGACCATCACCCTGGAGGTCGAGCCCAGT 1869602 Query 23671 GACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||||| | |||| | |||| | |||||||| || | || ||||| || Sbjct 1869603 GACACCATTGAAAATGTTAAGGCCAAAA-TCCAGGACAAAGAGGGCATCCCTCCAGACCA 1869661 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || || |||||||| || |||||||||| |||||| | ||| ||||| Sbjct 1869662 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAAGACGGCCGCACTCTCTCCGACTACAA 1869721 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || ||||||||||| | ||| | || || | || ||||||| Sbjct 1869722 CATCCAGAAAGAGTCCACCCTCCATCTGGTCTTGCGTCTGAGAGGAGG 1869769 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || |||||||| || || || |||||||| || || || ||| Sbjct 1869771 ATGCAGATCTTTGTGAAGACCCTCACAGGCAAGACCATCACTCTGGAGGTCGAGCCCAGC 1869830 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| | || | | || || ||||| | || || || || Sbjct 1869831 GACACCATTGAGAATGTCAAAGCTAAGA-TCCAGGATAAGGAAGGCATCCCTCCTGACCA 1869889 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || || || ||||| || |||||||| | ||||| | ||| ||||| Sbjct 1869890 GCAGAGGCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAA 1869949 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || |||||||||||||| | ||| | || | | || |||||||| Sbjct 1869950 TATCCAAAAAGAGTCCACCCTCCATCTTGTCCTCCGTCTGAGAGGAGGA 1869998 Score = 89.7 bits (98), Expect = 3e-13 Identities = 142/201 (71%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||| || || || ||||| || || || || |||||| | || || || || Sbjct 1869312 AAGATGCAGATCTTTGTGAAGACCCTGACTGGTAAGACCATCACTTTGGAGGTCGAGCCC 1869371 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | ||||| |||| ||| | ||| | || | | || || ||||| | || || || Sbjct 1869372 AGTGACACCATTGAGAATGTCAAAGCTAAGA-TCCAGGATAAGGAAGGCATCCCTCCTGA 1869430 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 || ||| | | || ||||| ||||| || |||||||||| ||||| | ||||| Sbjct 1869431 CCAGCAGAGGCTGATTTTTGCTGGCAAGCAGCTGGAAGACGGCCGCACCCTGTCAGATTA 1869490 Query 23787 CAACATACAAAAAGAGTCCAC 23807 |||||| || || |||||||| Sbjct 1869491 CAACATCCAGAAGGAGTCCAC 1869511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337970361838700