Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq13 161 7e-35 >seq13 Length=13670824 Score = 161 bits (178), Expect = 7e-35 Identities = 142/177 (80%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267 || || |||| |||||| |||||||| ||||| || | |||||||||||| || || || Sbjct 11903247 AGTCCCGTGATGTGAGCGATCATGTAGGTGAGAAGTGCGTAGCTGGCGATATTGAAAGGG 11903188 Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327 || || || ||||| || ||||| | |||||| ||||||||||| ||||| |||||| | Sbjct 11903187 ACGCCCAGACCCATATCACCCGAGCGCTGGTACAGCTGACACGACAGCTCGCCATCGATC 11903128 Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTG 27384 ||||| ||||| || | ||||||||| || || |||||||||||| || |||| || Sbjct 11903127 ACGTAGAACTGGCAGAGGGCGTGGCAGGGGGGCAGAGCCATGAGGGGCAGGTCTGTG 11903071 Score = 138 bits (152), Expect = 8e-28 Identities = 127/161 (79%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 27496 GTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCT 27555 ||||| ||||| || || |||||||| ||||| |||||||| ||||||||||| |||||| Sbjct 11902520 GTGTATTCTGCACCAAAGTGCCTCCACTGGAAACCGTACACGGGTCCCAGGTCGCCCTCT 11902461 Query 27556 TCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATC 27615 || || | | ||| || || |||| || | || || |||||||| ||||||||| Sbjct 11902460 TCTCTTTCCGTGAACCCGAGATTATCCAGGAACTGTCGAGACCCGTTGGCTTCCCAGATC 11902401 Query 27616 TTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 27656 || ||||| ||||| |||||||| |||| ||| || ||||| Sbjct 11902400 TTCACCCCTTTCTCTGAGAGCTCCTTGGCGTTGGTTGACCC 11902360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369464305410275