Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq14 527 9e-145 seq45 89.7 7e-13 seq11 86.0 9e-12 >seq14 Length=13523219 Score = 527 bits (584), Expect = 9e-145 Identities = 1287/1941 (66%), Gaps = 17/1941 (1%) Strand=Plus/Minus Query 75656 TTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTA 75715 || || ||||| || |||||| | |||||| || | || | || |||||||| || Sbjct 9107219 TTTTTCATCTCCTCGCTCCACAGTCCTCTCTCCGTCAGGTCTTTGAGCAGATGAGGGTTG 9107160 Query 75716 ACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCC 75775 || || ||||| ||||| |||| || || || ||||| || || ||||| || | || Sbjct 9107159 ACGATCTGAAACTCTCCGGACAGGACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCCTCG 9107100 Query 75776 ACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAAT 75835 | || || ||||| |||| || || || || || || || ||||| || |||| || Sbjct 9107099 ATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGCATCGGGGCCAGCAGC 9107040 Query 75836 AAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGA 75895 | || || || | || || | ||| || || || || ||||| ||||| || Sbjct 9107039 AGGCTGTTCCTCACGCCGTGCTTGGCGATCTTTTCCTTCAGCAGCTTCCAGTCCCACAGG 9106980 Query 75896 TCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCA 75955 || | || ||||| | ||||| || || || || ||||| || | || Sbjct 9106979 TCGGTGGGCGTCTTCTCCCACATGTCGTACTGGAGGATGCCCTTGCTGACAGGACAGCCT 9106920 Query 75956 TTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCG 76015 | ||||| ||||| | || || | || || ||||| |||||||| | || || Sbjct 9106919 TCGTATGTCTCGTAGGGGCCCAACTCGGCTGCCAGCTCGCAGCTCGCCTCCAGGGCGGCG 9106860 Query 76016 TAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGA 76075 || || || || || || |||| | || || || || || | || ||||| || Sbjct 9106859 TAGTAGATGGTCTCAAAGATCTGGATGTTCAGCAGCTGAGCCTCTGGGCTTTCAAAGGGG 9106800 Query 76076 TAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGT 76135 ||| | | || || || || || || | ||||| || || || ||||| || || || Sbjct 9106799 TAACGCATCAGGATGAAGGCGTCGGCCAAACCCTGGACGCCGATTCCAATTGGCCTGTGG 9106740 Query 76136 CTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTG 76195 | ||| ||||| | ||||| || || | ||||| || ||||| ||||| || || || Sbjct 9106739 CGCTTGTTGGACTTATCAGCCTCGGGCACTGGGTAGTAGTTAATCTCTATGATCTTGTTC 9106680 Query 76196 AGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATCT 76255 || || |||| | ||||| ||| || ||||| || ||||| | | || Sbjct 9106679 AGGTTCTTGACGATAACTTTGGTCACAGACTCCAGTTTTTTGAAGTCAAAAGTCCGCTCG 9106620 Query 76256 A---TCACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCA 76312 | || |||| || ||||| || || || |||||||| ||||| ||||||| || Sbjct 9106619 GGGGTGACGTACATGTTGAGAGCGATGGAGGCCAGATTACAGACGGCGACCTCATCGTCA 9106560 Query 76313 TTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGT 76372 ||| |||| | || || ||||| || || || || ||||| || |||||||| ||| Sbjct 9106559 CTGGTGTATTCAACGATTTCGGTGCAGAGGTTGCTGCATTTGATGGTGCCAAGATTCTGT 9106500 Query 76373 TGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATC 76432 ||||||||||| |||| || | ||| || || || | |||| || || || || || Sbjct 9106499 TGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTACGGTGTACCCGTCTCCGTC 9106440 Query 76433 TGTGATTCGATAATAGATTTCCAGA-CGACTCTAGCTTTTATTATAGATTTGTATCGCTT 76491 || || ||||| | | | ||| | | || ||| || | | | ||| ||| Sbjct 9106439 TGGGACTCGATGACGGCGTGCCACAGCTGCT-GAGCCTTCACAACACGCTTGACCCGCCC 9106381 Query 76492 CTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACC 76551 ||| | ||||| || || || | | ||||| || || ||||| || |||| || Sbjct 9106380 CTCCTTCTCATACTGGGTGTAGAGCTTCTCAAACTCCTCCCCCCAGCACTCGTCCAGCCC 9106321 Query 76552 AGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAA 76611 || || || | |||||||||| ||||| || | || || | ||||| || Sbjct 9106320 GGGGCACTCGCTGGGACACATCAGAGACCAGTCCTGGTTGCTCTCGACTCTCTTCATGAA 9106261 Query 76612 GAGATCAGGTATCCATAGAGCAATA-AATAGATCTCGGGTTCTACGTTCTTCATTTCCTG 76670 | || || ||||| | ||| || || ||||||| || ||| | || || || |||| Sbjct 9106260 CAAGTCGGGGATCCACA-AGCCGTAGAAAAGATCTCTGGCTCTTTGCTCCTCCTTCCCTG 9106202 Query 76671 TATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCG 76730 | ||||| || || || ||||| || | | ||| | |||||||| || || || || | Sbjct 9106201 TGTTCTTCTTCAGCTCCAGGAAGTCAAACACGTCAAAGTGCCATGGCTCCAGGTACATGG 9106142 Query 76731 CCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAA 76790 | | | || |||| || || || ||||| || | ||| | || ||||| || || | Sbjct 9106141 CGAAGGCCCCGGGTCTCTTGTTGCCGCCCTGGTCGACATAGCGCGCCGTGTTGTTGTAGA 9106082 Query 76791 CTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCAC 76850 |||||| ||| || | | ||||| || | || || || |||| ||| || || || Sbjct 9106081 CTCTCAGCATGGGGACCAGCCCGTTTGAGTTGCCGTTGGTGCCAGCAATGTAGCTCCCCG 9106022 Query 76851 ATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCAC 76910 || | || || | | | ||| |||||||| || || ||||| || |||| Sbjct 9106021 TTGATCTGATGCAGCTGACCGCCACGCCGATTCCTCCAGCTGACTTGGAGATGAGGGCAC 9105962 Query 76911 AGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAAC 76970 | | |||| |||||||| ||||| || || || |||||| ||||| | || || || | Sbjct 9105961 ACTGCTTCAGCGTGTCATAAATGCCGTCGATGCTGTCATCCTTCATGGTGAGCAGGAAGC 9105902 Query 76971 AGCTAGACATTTGA----TGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGA 77026 |||| |||| ||| || || |||||||| || || | |||||||| || || Sbjct 9105901 AGCTGGACAGCTGAGGCCTGTTG----GTTCCTGCGTTGAAGAGCGTAGGAGACGCGTGG 9105846 Query 77027 GTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGA 77086 |||||||| || || || || || ||||| || || || | || || ||| | || Sbjct 9105845 GTGAACCACTTCTCTGAGAGCAGGTTGTAGGTCTCGATGGCGGCGTCGATAGCTGTTTTG 9105786 Query 77087 TGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTT 77146 || || || ||||| || | ||| | ||| ||||| || || || | || || Sbjct 9105785 TGGATACCAACAGCCACTCTCATGAGCATGTGCTGCGGCCGCTCGGCCACTTTGCCGTTG 9105726 Query 77147 ATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 77206 || |||| |||||| || |||| ||| || || ||||| ||||||| || || ||| Sbjct 9105725 ATCTTCAGCAAGTAGGAACGCTCCAGAGTCTTGAAGCCAAAGAAGTTGTAGGAGAAATCT 9105666 Query 77207 CTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAACAATATCCATGACA 77266 || ||| |||| || |||| || || ||| || | || ||| || || | | Sbjct 9105665 CTGTCGAAAATGATGGCCGAGTTGAGGCGGTCTTTGTTTTCAAGAACGATGTCGAGGGTC 9105606 Query 77267 GTGGTAGAAATAATTGGAGATCGTATTCCATTTTTAGGATTAACATAGTTAAATAAGTCT 77326 | || || || || || | || ||| ||| || || ||||| || | ||| Sbjct 9105605 TCCTTGGAGATCATAGGGGAGTGGCGTCTATTCAGAGGGTTGACGTAGTTGAACAGGTCC 9105546 Query 77327 TCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTA 77386 ||||| || || || || | ||| ||||| |||||||| || || || ||||| || | Sbjct 9105545 TCCATCACCTCACTGAACACTTTCTTTGTCTCCTTGTGCAGGTTGGAGACGGCGATCCGT 9105486 Query 77387 GCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCT 77446 ||||| || || |||||||| || |||| || ||| |||||| || || ||||| || Sbjct 9105485 GCAGCGAGGATGGCATAGTCTGGGTGTTTGGTCGTGAGGGTGGCAGCGATCTCTGCAGCC 9105426 Query 77447 AAAGTATCTAATTCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGGCT 77506 | ||| || | || | || || || || | || || || || || || ||||| | Sbjct 9105425 AGAGTGTCGAGCTCCACTGTGGTGACACCACTGTACAGACCCTGGATCACCTTCATTGTG 9105366 Query 77507 ATTTTGATAGGATCTACAAACTCGGTGTTCAAACCATAACATAATTTTCT-AATACGAGA 77565 || | | ||||| || || || | ||||| ||||| || || |||| |||||||| Sbjct 9105365 ATCTGAGTTGGATCCACGAAGTCAGAGTTCAGCCCATAGCA-AAGCTTCTGGATACGAGA 9105307 Query 77566 TGTGATTTTATCAAACATGAC 77586 ||||||||||| |||||||| Sbjct 9105306 GGTGATTTTATCGAACATGAC 9105286 Score = 111 bits (122), Expect = 2e-19 Identities = 127/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 75444 TCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATAT 75503 |||| |||||||| |||||||| || |||||| || | || || || || || || | Sbjct 9107627 TCCAGCCGTAGAAGTGCATGCTGGTCAGTTTGCCGTAGTTTGGCTCAGCGATGTGGATGT 9107568 Query 75504 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 75563 |||| ||||| || || |||||| | || |||| ||||| ||||| || | ||||||| Sbjct 9107567 TCATGGACTGGCTCTGGTCGATGTAGGCGCCTCGGTCAGCAGCCATCTTCAGTATGGTCT 9107508 Query 75564 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 75614 | || | |||||||| | ||||| ||| || || | ||||||||||| Sbjct 9107507 TCTGGGAGATTTCCCACACGGTTTTATAAAGCTGCTTCAGATCATCTGGAA 9107457 >seq45 Length=2253462 Score = 89.7 bits (98), Expect = 7e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713 ||||| || || || | || || || || || ||||||||||||| ||| | ||| || Sbjct 2024579 TCATCCCTGCTGATCAGCTCATTGGAGAAGGTAAGCCCAGGCATTAATCCTCTCTTCTTC 2024638 Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773 |||||||| || || ||||| || || || ||||| || || || ||||| || || || Sbjct 2024639 AGCCAAAAGATGGCAGCGAATGAACCGGAGAAGAAGATTCCCTCCACAGCAGCAAAAGCC 2024698 Query 46774 ACAAGTCTCTCTCC 46787 |||| || ||| || Sbjct 2024699 ACAATTCGCTCACC 2024712 >seq11 Length=13916851 Score = 86.0 bits (94), Expect = 9e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 76327 TATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTT 76386 |||||| ||||| ||||| || | ||||| || || ||||| || ||||||||||| | Sbjct 4879581 TATCTCTGTGCACAGATTGCTGGATTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCT 4879522 Query 76387 GTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAAT 76446 ||| || | |||||| || || | | || ||||| ||||| ||||||| ||||| || Sbjct 4879521 GTTGCAGGCGTCCTTGTAGAGCATGTATGGTGTTCCCGTTTCTGTCTGTGACTCGATGAT 4879462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712849516248000