Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq7 150 4e-31 seq11 93.3 1e-13 >seq7 Length=16146599 Score = 150 bits (166), Expect = 4e-31 Identities = 167/221 (76%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || |||||||| || || || || || |||||||| ||||| || || ||| Sbjct 1869546 CAGATCTTTGTGAAAACCCTGACCGGCAAGACCATCACCCTGGAGGTCGA--GCCCAGTG 1869603 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| || || || || || || ||||||||||| || |||||||| ||||||| Sbjct 1869604 ACACCATTGAAAATGTTAAGGCCAAAATCCAGGACAAAGAGGGCATCCCTCCAGACCAGC 1869663 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || || ||||||||||| || ||||| ||||| || | ||||| |||| || ||| Sbjct 1869664 AGCGTCTCATCTTCGCCGGCAAGCAGCTGGAAGACGGCCGCACTCTCTCCGACTACAACA 1869723 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| ||||| || || || ||||| || ||| | || ||| Sbjct 1869724 TCCAGAAAGAGTCCACCCTCCATCTGGTCTTGCGTCTGAGA 1869764 >seq11 Length=13916851 Score = 93.3 bits (102), Expect = 1e-13 Identities = 105/139 (76%), Gaps = 4/139 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--G 177981 || || |||||||| || ||||| || || || |||||||||||||| | ||| || | Sbjct 8402472 CAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTTG--AGCCCAGTG 8402529 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| || || ||||| ||||| |||||||| ||||| || || || || |||| Sbjct 8402530 ACACCATTGAAAATGTCAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAGC 8402589 Query 178042 AACGACTTATCTTCGCCGG 178060 | | || ||||| || || Sbjct 8402590 AGAGGCTGATCTTTGCTGG 8402608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203584297772850