Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq11038 618 5e-172
seq15624 116 4e-21
seq19576 114 2e-20
seq3431 84.2 3e-11
>seq11038
Length=78219
Score = 618 bits (684), Expect = 5e-172
Identities = 1317/1958 (67%), Gaps = 33/1958 (2%)
Strand=Plus/Plus
Query 53078 ATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGA 53137
|| ||| ||||||| ||||| || ||||| | | || || | | | || |||
Sbjct 22155 ATGATCTTATTCTTCATCTCCTCGTTCCACAGCCCCCGTTCAGTGAGGTCCTTCAGCAGA 22214
Query 53138 TGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTA 53197
|| || || || | ||||| |||||||| | ||||| || ||||| || || |||||
Sbjct 22215 TGTGGGTTTACAATCTGAAACTCTCCAGAGAGGACTCTACGTGTGTAGATGTTGCTGGTG 22274
Query 53198 TACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGT 53257
|| | ||| | |||||||| || || | ||||| || || || || || ||||| ||
Sbjct 22275 TAGGCTTCGATGGACTCATTGTTGCCGAGTATTTGTGCTGTGGAGGCTGTGGGCATGGGG 22334
Query 53258 GCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAA 53317
|||| ||| | ||| ||||| | ||||| | | || || || || || | | |||
Sbjct 22335 GCCAACAACAGACTGTTTCTCACACCGTGTTTAGCAATCTTCTCCTTAAGCAGCTTCCAG 22394
Query 53318 TTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCG 53377
| ||| || || | || || || ||||| || |||| |
Sbjct 22395 TCCCAGAGCTCAGTGGGCACCTTTTCCCACATGTCATACTGCAGAATGCCTCTACTCACT 22454
Query 53378 TACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCT 53437
|| ||| ||||| || || || || || || || || | || || || |||||
Sbjct 22455 GGAGAGCCTGGGTATGTCTCATAAGGCCCATCTTTTTCTGCCAACTCCCAGCTTGCCTCC 22514
Query 53438 AATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTA 53497
| ||| | || || ||||| || ||||||| |||| || || ||||| ||||
Sbjct 22515 AGGGCAGCATAGTAGATGGTCTCAAAGATCTGGATATTCAGCAGCTGGGCTTCAGGGCTT 22574
Query 53498 TCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATA 53557
|||||||||||| | ||| || || || ||||| | || || |||||||| |||||
Sbjct 22575 TCAAATGGATAACGCATGAGGATGAAGGCATCTGCAAGACCCTGCACACCAATCCCGATT 22634
Query 53558 GGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATA 53617
|| || || | ||| || || | || ||||| |||| || || || ||||| || ||
Sbjct 22635 GGCCTGTGGCGCTTGTTTGAATTCTCTGCTTCAGGAACTGGGTAGTAGTTAATGTCAATG 22694
Query 53618 ATTTTATTGAGGTTTCTGACAATTACTT---TGACC---ACATCCTTCAGTTTGAGAAAA 53671
|| || ||||||||||| |||||||||| ||||| || ||| |||| ||
Sbjct 22695 ATCTTGTTGAGGTTTCTTACAATTACTTTAGTGACCGAGGCAAGCTT---TTTG---AAG 22748
Query 53672 TCAAA---TTGTCCATCTATTACAAACATGTTCAATGCAATAGATGCCAGATTACAAACG 53728
||||| || | | ||| ||||||| | ||||| || |||| ||||| |||
Sbjct 22749 TCAAAGGTGCGTTCCGGAGTAACATACATGTTGAGAGCAATGGAGGCCAAGTTACAGACG 22808
Query 53729 GCTACCTCA--TTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGA 53786
|| || ||| || || | | ||| | | ||||||||||| | ||||| || ||||
Sbjct 22809 GCCACTTCATCTTTGCTT--GTATACTCCACAATCTCAGTGCACAAGTTACTGCATTTGA 22866
Query 53787 TGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATG 53846
|||| || ||||| || || |||||||| ||||||| ||||| || || | ||| | |
Sbjct 22867 TGGTGCCCAAATTCTGCTGGTTACTCTTCCTGTTACAGGCATCTTTGTACAACATGTAAG 22926
Query 53847 GCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTA 53906
| || || ||||| |||| || || || || || | ||| | ||||||| | |
Sbjct 22927 GTGTTCCTGTTTCTGTCTGAGACTCGATGATGGCATACCACAACTGCTGAGCCTTGACCA 22986
Query 53907 TAGATTTGTATCTCTTTTCTCTTTCGTAT--AGTGTATACAATCGTTCAAACTCGTCTCC 53964
|| ||| || ||| ||| |||||| | || |||||||| || ||
Sbjct 22987 CCCGCTTCACTCTACCCTCCTGTTCATATTGAGTGTAGAGCTTC--TCAAACTCCTCCCC 23044
Query 53965 CCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATC 54024
|||| | ||||| ||||| || ||| || ||||||| ||||| || || |
Sbjct 23045 CCAACACTCATCCAACCCAGGGCACTCACTGGGGCACATCAGAGACCAGTCCTGGTTGTT 23104
Query 54025 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTC 54083
| ||| | ||||| || |||||||| ||||| || || ||| || || |||| | |
Sbjct 23105 TTCCACCCTCTTCATGAACAGATCAGGGATCCATAGGGC-ATAGAAGAGGTCTCGTGCCC 23163
Query 54084 TATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCC 54143
| || ||||| || || || ||||| || || || ||||| | | | |||| | ||||
Sbjct 23164 TCTGCTCCTCTTTACCAGTGTTCTTCTTCAGCTCAAGGAAGTCAAACACATCAAAGTGCC 23223
Query 54144 ACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATC 54203
| || |||| |||||||| | | | || || ||||| || || || || || | ||| |
Sbjct 23224 ATGGCTCCAGGTATATGGCAAAAGCACCCGGTCGTTTATTGCCACCTTGGTCCACGTAGC 23283
Query 54204 TAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCC 54263
|||||||| || || ||||||| ||| || | || ||||| || |||||| || |
Sbjct 23284 GTGCGGTGTTGTTGTACACTCTCAGCATCGGCACAAGGCCATTTGAGTTACCATTTGTTC 23343
Query 54264 CGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCA 54323
| | || || || || | | | |||| |||| || || ||| ||||| |||||
Sbjct 23344 CAGCAATGTAACTACCTGTTGATCTAATACAGCTAACTGCTACACCAATCCCTCCTGCAG 23403
Query 54324 TTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCA 54383
||||||||| | || ||| |||| | |||||||| ||||| || || || ||||||
Sbjct 23404 ATTTAGAGATGAGAGCACATTGTTTGAGTGTATCATAAATGCCATCAATGCTGTCATCCT 23463
Query 54384 TCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGG 54443
||||| || || || ||||| || | ||| | | | | || || || || || | |
Sbjct 23464 TCATGGCCAGCAGGAAGCAGCTGGAGAGCTGGGGTCTATTGGTGCCTGCGTTGAACAGAG 23523
Query 54444 TAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGT 54503
| ||||| || || || ||||| || ||||| || || ||||| ||||| || |||| |
Sbjct 23524 TGGGAGAGGCATGAGTGAACCACTTCTCAGACAGCAGGTTGTAGGTCTCAATGGCTGCAT 23583
Query 54504 CTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAA 54563
||||||| | || ||||| || || || | ||| | ||||||||| || | |||
Sbjct 23584 CTATATCAGTGTTGTGGATTCCAACAGCTACTCTCATGAGCATGTGCTGTGGGCGCTCAG 23643
Query 54564 CGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGT 54623
| | || || |||||||||| |||||| || || || ||||| ||||| | |
Sbjct 23644 CCACTTTACCATTGATTTTCAGCAGGTAGGAGCGCTCTAATGTCTTAAAGCCAAAGAAAT 23703
Query 54624 TGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTA- 54682
|||| ||||| || | || ||||| ||| | |||||||| || | | |||| |
Sbjct 23704 TGTAAGAAAAATCCCTATCATAAATTATAGCAGAGTTGAGGCGGTC--TTTGTTTGCAAG 23761
Query 54683 -ACTACATCCATGGTAATACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTG 54739
|| | ||| | ||| ||| || || || || || || | |||| |||||||
Sbjct 23762 GACAATATCTAGGGT--CTCTTGGGAGATCATGGGGGAGTGGCGCTTATTTAAAGGATTG 23819
Query 54740 ACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGA 54799
||||||| || | ||||| ||| || ||||| || | || || || ||||| || ||
Sbjct 23820 ACATAGTGGAACAGATCCTCCATGACATCACTGAACACCTTCTTGGTCTCTTTATGGAGG 23879
Query 54800 TTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTG 54859
|| || || || || | || || || ||||||||||| || || | || || |||
Sbjct 23880 TTGGACACAGCAATCCGTGCAGCCAGGATGGCATAATCTGGGTGCTTCGTGGTCAGTGTG 23939
Query 54860 GCTGCTATTTCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCT 54919
|| || || || || | || |||||||| || || || || ||||| | || | |||
Sbjct 23940 GCAGCAATCTCTGCAGCAAGTGTGTCCAACTCCACAGTGGTCACTCCGCTGTACAGACCT 23999
Query 54920 TGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACAT 54979
||||| |||||||| | |||| | || || | | || | || | ||||||||
Sbjct 24000 TGGATCACCTTCATCGTGATTTGTGTGGGGTCCACAAACTCTGCATTGAGCCCATAACAG 24059
Query 54980 AATTTTCTAATACGAGATGTGATTTTATCAAACATGAC 55017
| || || ||||| ||||||||||||||||||||
Sbjct 24060 AGCTTCTGGATTCGAGAGGTGATTTTATCAAACATGAC 24097
>seq15624
Length=12484
Score = 116 bits (128), Expect = 4e-21
Identities = 142/192 (74%), Gaps = 4/192 (2%)
Strand=Plus/Plus
Query 53388 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 53447
||||||| || || ||||| || | ||||||||||||| || ||||| || ||| | |
Sbjct 11343 CATATGTTTCATAAGGTCCATCTTGGGCAGCTAGTTCACAGCTGGCCTCCAAAGCAGCAT 11402
Query 53448 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGC--TTCCAGGCTATCAAATGG 53505
|||||||||| || || |||| | || |||| || || || || || || |||||
Sbjct 11403 AATAAATGGTCTCAAAAATCTGGATGTTGAGATGCTGGGCCTTTTCA--CTTTCGAATGG 11460
Query 53506 ATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATG 53565
|||| | |||||| || ||||| || | || ||||||||||| || |||||||| ||
Sbjct 11461 ATAACGCATGAGAATGAAGGCGTCCGCAAGACCCTGAACACCAATCCCAATAGGTCTGTG 11520
Query 53566 TCTCTTATTAGA 53577
| | | |||||
Sbjct 11521 GCGCATGTTAGA 11532
Score = 86.0 bits (94), Expect = 7e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 53750 TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTA 53809
|||| || ||||||||||| || || || | |||||||| |||| ||| || || ||
Sbjct 11855 TATTCTACAATCTCAGTGCACAGGTTGCTGGATTTGATGGTGCCTAGATTCTGCTGGTTG 11914
Query 53810 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGAT 53869
||||| | || || ||||| || || || ||| |||| ||||| || || |||| ||
Sbjct 11915 CTCTTCCTATTGCATGCATCTTTGTAGAGCATGTATGGGGTACCCGTCTCTGTCTGTGAC 11974
Query 53870 TCTATAATCGCTTTCCA 53886
|| ||||| || | |||
Sbjct 11975 TCAATAATGGCATACCA 11991
>seq19576
Length=429644
Score = 114 bits (126), Expect = 2e-20
Identities = 107/136 (79%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 24157 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 24216
|||| ||||| || || | ||| |||||| | || || || |||||||| || | |||||
Sbjct 417021 CCTCATCTCTGCTGATAAGTTCATTGGAATAAGTAAGCCCAGGCATTAGACCCCTCTTTT 416962
Query 24217 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 24276
| |||||| | |||| ||||| |||||||| ||||||||||| ||||| || ||||| |
Sbjct 416961 TCAGCCAATAAATGGCGGCAAAGGATCCAGAGAAGAAAATTCCCTCTACAGCTGCAAATG 416902
Query 24277 CAATAAGTCTTTCTCC 24292
| | || |||||| ||
Sbjct 416901 CCACAATTCTTTCACC 416886
>seq3431
Length=351
Score = 84.2 bits (92), Expect = 3e-11
Identities = 76/96 (79%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 24157 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 24216
||||||| | ||||| | ||| ||||| || || ||||||||||| ||||| || || |
Sbjct 256 CCTCGTCGCGGCTAATAAGTTCATTGGAGAAAGTCAGTCCGGGCATCAGGCCTCGTTTCT 315
Query 24217 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGA 24252
| ||||| || |||| ||||| |||||||| ||||
Sbjct 316 TCAGCCAGAAAATGGCGGCAAAGGATCCAGAGAAGA 351
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593375297033760
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