Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq10050 136 5e-27
seq11547 107 2e-18
>seq10050
Length=29434
Score = 136 bits (150), Expect = 5e-27
Identities = 131/167 (78%), Gaps = 1/167 (1%)
Strand=Plus/Minus
Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809
|| || |||| |||||||| |||||| || || || || |||||||| || ||||| ||
Sbjct 22568 AGTCCTGTGATGTGGGCGATCATGTATGTTAGAAGTGAATAGCTGGCAATATTGAAAGGT 22509
Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869
|| |||||||||||||| || |||||||| || ||||| ||||| ||||| || | |
Sbjct 22508 ACTCCCAGCCCCATGTCACCAGAGCGCTGATAAAGCTGACAGGACAGCTCACCATCGCAC 22449
Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATG-GCGG 145915
|| |||||||| || || |||||| || ||||| |||||| ||||
Sbjct 22448 ACATAGAACTGACAAAGAGCGTGGCATGGGGGCAGAGCCATGAGCGG 22402
>seq11547
Length=21244
Score = 107 bits (118), Expect = 2e-18
Identities = 119/159 (75%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 145753 CCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACC 145812
|| |||| |||||||| |||||| || | || | ||||| || || |||| || ||
Sbjct 14641 CCTGTGATGTGGGCGATCATGTATGTTACAAGTGCATAGCTAGCAATACTGAAAGGTACT 14582
Query 145813 CCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACG 145872
|||||||||||||| || |||||||| | ||||| ||||| ||||| || | |||
Sbjct 14581 CCCAGCCCCATGTCACCAGAGCGCTGATTAAGCTGACAGGACAGCTCACCATCGCTCACA 14522
Query 145873 TAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATG 145911
|||||||| || || ||||| || ||||| ||||||
Sbjct 14521 TAGAACTGACAAAGAGCCTGGCATGGGGGCAGAGCCATG 14483
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589732622954480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |