Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014- 12-02] 46,662 sequences; 679,761,122 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq10050 136 5e-27 seq11547 107 2e-18 >seq10050 Length=29434 Score = 136 bits (150), Expect = 5e-27 Identities = 131/167 (78%), Gaps = 1/167 (1%) Strand=Plus/Minus Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 || || |||| |||||||| |||||| || || || || |||||||| || ||||| || Sbjct 22568 AGTCCTGTGATGTGGGCGATCATGTATGTTAGAAGTGAATAGCTGGCAATATTGAAAGGT 22509 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 || |||||||||||||| || |||||||| || ||||| ||||| ||||| || | | Sbjct 22508 ACTCCCAGCCCCATGTCACCAGAGCGCTGATAAAGCTGACAGGACAGCTCACCATCGCAC 22449 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATG-GCGG 145915 || |||||||| || || |||||| || ||||| |||||| |||| Sbjct 22448 ACATAGAACTGACAAAGAGCGTGGCATGGGGGCAGAGCCATGAGCGG 22402 >seq11547 Length=21244 Score = 107 bits (118), Expect = 2e-18 Identities = 119/159 (75%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 145753 CCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACC 145812 || |||| |||||||| |||||| || | || | ||||| || || |||| || || Sbjct 14641 CCTGTGATGTGGGCGATCATGTATGTTACAAGTGCATAGCTAGCAATACTGAAAGGTACT 14582 Query 145813 CCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACG 145872 |||||||||||||| || |||||||| | ||||| ||||| ||||| || | ||| Sbjct 14581 CCCAGCCCCATGTCACCAGAGCGCTGATTAAGCTGACAGGACAGCTCACCATCGCTCACA 14522 Query 145873 TAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATG 145911 |||||||| || || ||||| || ||||| |||||| Sbjct 14521 TAGAACTGACAAAGAGCCTGGCATGGGGGCAGAGCCATG 14483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589732622954480