Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014- 12-02] 46,662 sequences; 679,761,122 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq40635 104 3e-17 >seq40635 Length=114327 Score = 104 bits (114), Expect = 3e-17 Identities = 186/270 (69%), Gaps = 4/270 (1%) Strand=Plus/Plus Query 83126 CCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGA 83185 || || | ||| | || ||| |||||||||||||||| | |||||| | |||||| || Sbjct 32629 CCATCCGGACCGATCAGGAATTTCTCGAAGTTCCAGGAGATGTCGTTCCTGCACACCGGG 32688 Query 83186 GACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGC 83245 |||| |||| | |||||||| || ||| | | | |||| ||||| |||| || Sbjct 32689 CTCCAGATGATGAATTTGGGGTCGCCCATGAGGGAGGTGGTGTCATCGCTGGGCGTAGGT 32748 Query 83246 AGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGC--CCTTGCACCGTTGACCTCGCACT 83303 || |||| || | |||| | || || || | ||| ||||| || || ||| Sbjct 32749 AGTTTCTCTTTCAGATAAACGAACAAAGGGTGCGCGTCTTTG--CCGTTCACTTCCAACT 32806 Query 83304 TCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAG 83363 |||| | ||| || | |||||||| || ||||| |||||||||| |||| ||| Sbjct 32807 TCTCCATCAGCTGGAACCTTGGCTCGAAACCATTCCCCGGACGGACGTATTTCAAGGACA 32866 Query 83364 GCAAGATCTCGGCATTCTGGGCGTTTTCCT 83393 || |||||| |||| | | ||| |||| Sbjct 32867 ACAGGATCTCTTCATTTTTGCAGTTCTCCT 32896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608441704046480