Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014- 12-02] 46,662 sequences; 679,761,122 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq34043 95.1 2e-14 >seq34043 Length=9316 Score = 95.1 bits (104), Expect = 2e-14 Identities = 127/174 (73%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 51885 GATAGCCAGAGCATTATGGTTGTACTATATATCCAAAGGGATAGAATACTTGGATACGGT 51944 ||||||| ||| | |||| |||||| || || ||||| | || | |||| || || Sbjct 8444 GATAGCCTCAGCTCTTTGGTGGTACTACATTTCTAAAGGAGTGGAGTTTCTGGACACTGT 8385 Query 51945 ATTTTTCATACTTAGGAAAAAATTTAATCAGGTTAGTTTTCTACACGTATATCATCATTT 52004 ||||||||| | |||||||| || || || || || |||||||| || || ||||| | Sbjct 8384 ATTTTTCATTTTGAGGAAAAAGTTCAACCAAGTAAGCTTTCTACATGTCTACCATCACTG 8325 Query 52005 TACTATGTTTACTCTAG-GATGGATAGGTATTAAATGGTTTGCTGGAGGTCAGG 52057 || ||||| | ||| | | ||||| || || |||||| | | ||||| |||| Sbjct 8324 CACCATGTTCA-TCTTGTGGTGGATTGGCATCAAATGGGTCCCCGGAGGACAGG 8272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 922658322386480