Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq27510 147 2e-30
seq33802 104 3e-17
seq16345 102 9e-17
seq40586 98.7 1e-15
seq37664 98.7 1e-15
seq29256 98.7 1e-15
seq22143 98.7 1e-15
seq14977 98.7 1e-15
seq10936 98.7 1e-15
>seq27510
Length=34911
Score = 147 bits (162), Expect = 2e-30
Identities = 174/236 (74%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 42948 TCCTATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTG 43007
||||| | ||||||||| ||||||| |||||| || | ||| ||||| ||||| |||
Sbjct 29899 TCCTAGTTTCCTCCTCTCAAACGCAGCACCAAGTGGAGGGTGGATTCCTTCTGAATGTTG 29958
Query 43008 TAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGG 43067
|| |||| || || || | || || ||||||||||||||||| || || | |||||||
Sbjct 29959 TAGTCAGAGAGGGTGCGACCATCTTCAAGCTGCTTACCAGCGAAAATCAGCCTCTGCTGG 30018
Query 43068 TCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTC 43127
|| | || | | ||| |||||| ||| ||| |||| || | | ||||| ||
Sbjct 30019 TCAGGAGGGATACCCTCTTTGTCCTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTA 30078
Query 43128 GATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
| |||||| || | |||||||| || || || || ||||| ||||| ||||||||
Sbjct 30079 GGTTCCACTTCCAAAGTGATGGTCTTCCCAGTCAGGGTCTTCACAAAAATTTGCAT 30134
Score = 113 bits (124), Expect = 5e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|||||||| | ||| | |||||| || | ||| |||||| || || ||||| ||||
Sbjct 30136 CCTCCTCTCAGACGTAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 30195
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
||||| || | || ||||| ||||||||||| || || || | ||||||||| | ||
Sbjct 30196 AGAGTGCGGCCATCTTCTAGTTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCAGGAGGG 30255
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136
| | ||||| || ||| || || | | | | ||||| |||| || ||
Sbjct 30256 ATACCTTCCTTATCTTGGATCTTGGCCTTCACGTTTTCAATTGTGTCACTCGGCTCAACT 30315
Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186
|| | ||||||||||| || || || ||||| |||||||| ||||||||
Sbjct 30316 TCCAAAGTGATGGTTTTACCAGTCAGGGTCTTAACAAAGATCTGCATTTT 30365
>seq33802
Length=59224
Score = 104 bits (114), Expect = 3e-17
Identities = 69/77 (90%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 60061 ATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCAC 60120
|||| |||| || |||||||| |||||| ||||||||||||||||||||| ||||||||
Sbjct 5048 ATTTCCTCCCCGTCAGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCAC 4989
Query 60121 CACTATACTACCGAGGA 60137
|||||||||| ||||||
Sbjct 4988 CACTATACTAACGAGGA 4972
Score = 102 bits (112), Expect = 9e-17
Identities = 71/81 (88%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||| |||| |||| || | |||||| |||||| ||||||||||||||||||||| ||||
Sbjct 2174 AAAGATTTCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 2115
Query 60117 TCACCACTATACTACCGAGGA 60137
|||||||||||||| ||||||
Sbjct 2114 TCACCACTATACTAACGAGGA 2094
Score = 102 bits (112), Expect = 9e-17
Identities = 71/81 (88%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||| |||| |||| || | |||||| |||||| ||||||||||||||||||||| ||||
Sbjct 2489 AAATATTTCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 2430
Query 60117 TCACCACTATACTACCGAGGA 60137
|||||||||||||| ||||||
Sbjct 2429 TCACCACTATACTAACGAGGA 2409
Score = 102 bits (112), Expect = 9e-17
Identities = 71/81 (88%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||| |||| |||| || | |||||| |||||| ||||||||||||||||||||| ||||
Sbjct 2831 AAATATTTCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 2772
Query 60117 TCACCACTATACTACCGAGGA 60137
|||||||||||||| ||||||
Sbjct 2771 TCACCACTATACTAACGAGGA 2751
Score = 98.7 bits (108), Expect = 1e-15
Identities = 68/77 (88%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 60061 ATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCAC 60120
|||| |||| || | |||||| |||||| ||||||||||||||||||||| ||||||||
Sbjct 6433 ATTTCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCAC 6374
Query 60121 CACTATACTACCGAGGA 60137
|||||||||| ||||||
Sbjct 6373 CACTATACTAACGAGGA 6357
>seq16345
Length=60839
Score = 102 bits (112), Expect = 9e-17
Identities = 71/81 (88%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||||| | |||| || | ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 33848 AAAAAGTACCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 33789
Query 60117 TCACCACTATACTACCGAGGA 60137
|||||||||||||| ||||||
Sbjct 33788 TCACCACTATACTAACGAGGA 33768
Score = 98.7 bits (108), Expect = 1e-15
Identities = 72/83 (87%), Gaps = 2/83 (2%)
Strand=Plus/Minus
Query 60057 AAAAATTTT--CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 60114
|||||| || |||| || | |||||| |||||| ||||||||||||||||||||| ||
Sbjct 36061 AAAAATATTGACTCCACGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 36002
Query 60115 ACTCACCACTATACTACCGAGGA 60137
|||||||||||||||| ||||||
Sbjct 36001 ACTCACCACTATACTAACGAGGA 35979
Score = 93.3 bits (102), Expect = 5e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 60063 TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122
|| |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||
Sbjct 35529 TTCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCA 35470
Query 60123 CTATACTACCGAGGAT 60138
|||||||| |||||||
Sbjct 35469 CTATACTAACGAGGAT 35454
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 32022 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 31963
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 31962 TACTAACGAGGA 31951
Score = 84.2 bits (92), Expect = 2e-11
Identities = 61/71 (86%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 60067 TCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTAT 60126
||| || | |||||| |||||| ||||||| ||||||||||||| ||||||||||||||
Sbjct 37543 TCCCCGTCGGGGAATTGAACCCCGGTCTCCTGCGTGACAGGCGGGGATACTCACCACTAT 37484
Query 60127 ACTACCGAGGA 60137
|||| | ||||
Sbjct 37483 ACTAACAAGGA 37473
>seq40586
Length=28695
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 1850 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1909
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 1910 TACTAACGAGGA 1921
>seq37664
Length=211294
Score = 98.7 bits (108), Expect = 1e-15
Identities = 72/83 (87%), Gaps = 2/83 (2%)
Strand=Plus/Minus
Query 60057 AAAAATTTT--CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 60114
||||| ||| |||| || | ||||||||||||| ||||||||||||||||||||| ||
Sbjct 102234 AAAAACTTTGCCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 102175
Query 60115 ACTCACCACTATACTACCGAGGA 60137
||| |||||||||||| ||||||
Sbjct 102174 ACTTACCACTATACTAACGAGGA 102152
>seq29256
Length=33740
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 31622 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 31681
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 31682 TACTAACGAGGA 31693
>seq22143
Length=78845
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 18696 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 18755
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 18756 TACTAACGAGGA 18767
>seq14977
Length=4178
Score = 98.7 bits (108), Expect = 1e-15
Identities = 72/83 (87%), Gaps = 2/83 (2%)
Strand=Plus/Minus
Query 60057 AAAAATTTT--CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 60114
||| ||||| |||| || | |||||| |||||| ||||||||||||||||||||| ||
Sbjct 804 AAACATTTTTCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 745
Query 60115 ACTCACCACTATACTACCGAGGA 60137
|||||||||||||||| ||||||
Sbjct 744 ACTCACCACTATACTAACGAGGA 722
Score = 98.7 bits (108), Expect = 1e-15
Identities = 68/77 (88%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 60061 ATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCAC 60120
|||| |||| || | |||||| |||||| ||||||||||||||||||||| ||||||||
Sbjct 2236 ATTTCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCAC 2177
Query 60121 CACTATACTACCGAGGA 60137
|||||||||| ||||||
Sbjct 2176 CACTATACTAACGAGGA 2160
Score = 95.1 bits (104), Expect = 1e-14
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 60063 TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122
|| |||| || | |||||| |||||| ||||||||||||||||||||| ||||||||||
Sbjct 116 TTCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCA 57
Query 60123 CTATACTACCGAGGA 60137
|||||||| ||||||
Sbjct 56 CTATACTAACGAGGA 42
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| |||||||||||||
Sbjct 3728 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 3669
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 3668 TACTAACGAGGA 3657
>seq10936
Length=53695
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 29306 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 29247
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 29246 TACTAACGAGGA 29235
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571484073089360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |