Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014- 12-02] 46,662 sequences; 679,761,122 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq27510 98.7 6e-16 >seq27510 Length=34911 Score = 98.7 bits (108), Expect = 6e-16 Identities = 155/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 34177 CAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTC 34236 |||||||| ||| | || ||| ||||| ||||||||||| || || || | || Sbjct 29922 CAGCACCAAGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGACCATC 29981 Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC--GACGGGCACGCTCTCCTTG 34294 || | |||||| || |||||||| |||| ||||||||| || || || |||| ||| Sbjct 29982 TTCAAGCTGCTTACCAGCGAAAATCAGCCTCTGCTGGTCAGGAGGGATACCCTCT--TTG 30039 Query 34295 TCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATG 34354 || |||||| ||| | || | || | || | | ||| || |||| |||||| Sbjct 30040 TCCTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTAGGTTCCACTTCCAAAGTGATG 30099 Query 34355 GTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGCTC 34394 || || || || || || |||||||| || |||||| ||| Sbjct 30100 GTCTTCCCAGTCAGGGTCTTCACAAAAATTTGCATCCCTC 30139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322888271174720