Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014- 12-02] 46,662 sequences; 679,761,122 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq11038 91.5 3e-13 >seq11038 Length=78219 Score = 91.5 bits (100), Expect = 3e-13 Identities = 172/253 (68%), Gaps = 0/253 (0%) Strand=Plus/Plus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 ||||| |||| || ||||||| || | || || ||||||||||| || |||||| Sbjct 23394 CCTCCTGCAGATTTAGAGATGAGAGCACATTGTTTGAGTGTATCATAAATGCCATCAATG 23453 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTTCCACAA 94911 || ||||| | | | |||| |||||||| ||| || |||||| | || || Sbjct 23454 CTGTCATCCTTCATGGCCAGCAGGAAGCAGCTGGAGAGCTGGGGTCTATTGGTGCCTGCG 23513 Query 94912 TTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCA 94971 || ||||| ||||| || ||||| || || | | | |||| || | || || ||| Sbjct 23514 TTGAACAGAGTGGGAGAGGCATGAGTGAACCACTTCTCAGACAGCAGGTTGTAGGTCTCA 23573 Query 94972 ATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTGA 95031 ||| | | | || || | ||| || || ||||| || | ||| | ||||| ||| Sbjct 23574 ATGGCTGCATCTATATCAGTGTTGTGGATTCCAACAGCTACTCTCATGAGCATGTGCTGT 23633 Query 95032 GGGCGCTCAACCA 95044 ||||||||| ||| Sbjct 23634 GGGCGCTCAGCCA 23646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 988992370402210