Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq11038 307 1e-78
seq19576 98.7 9e-16
>seq11038
Length=78219
Score = 307 bits (340), Expect = 1e-78
Identities = 988/1519 (65%), Gaps = 13/1519 (1%)
Strand=Plus/Plus
Query 37123 AGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTA 37182
|| ||||| ||||||| |||||| |||||||| | ||||| | ||| || || |||||
Sbjct 22212 AGATGTGGGTTTACAATCTGAAACTCTCCAGAGAGGACTCTACGTGTGTAGATGTTGCTG 22271
Query 37183 GTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATT 37242
|| || | ||| ||||||||||| || | | |||||| | ||| || || || |||||
Sbjct 22272 GTGTAGGCTTCGATGGACTCATTGTTGCCGAGTATTTGTGCTGTGGAGGCTGTGGGCATG 22331
Query 37243 GGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTC 37302
|| || | | || || ||||||| || ||| || ||| ||| || || |||
Sbjct 22332 GGGGCCAACAACAGACTGTTTCTCACACCGTGTTTAGCAATCTTCTCCTTAAGCAGCTTC 22391
Query 37303 CAATCCCATAAATCTGTTGGGTTCTTTAACCACATATCATATTGTAGAATACCTTTACTC 37362
|| ||||| | || || || |||| |||||| ||||| || ||||| ||| |||||
Sbjct 22392 CAGTCCCAGAGCTCAGTGGGCACCTTTTCCCACATGTCATACTGCAGAATGCCTCTACTC 22451
Query 37363 GCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGAT 37422
||||||| | |||||||||||||| || | ||| || | || || || |
Sbjct 22452 ACTGGAGAGCCTGGGTATGTCTCATAAGGCCCATCTTTTTCTGCCAACTCCCAGCTTGCC 22511
Query 37423 TCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCG 37482
|| || || ||||| || || || || || || || ||||| | | | ||||| |
Sbjct 22512 TCCAGGGCAGCATAGTAGATGGTCTCAAAGATCTGGATATTCAGCAGCTGGGCTTCAGGG 22571
Query 37483 CTATCGAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGAACACCGATACCT 37542
|| || |||| ||| | || | || || |||| || | |||||| ||||| || ||
Sbjct 22572 CTTTCAAATGGATAACGCATGAGGATGAAGGCATCTGCAAGACCCTGCACACCAATCCCG 22631
Query 37543 ATGGGTCTATGTTTCTTATTAGATCTAGACGATTCTATCACTGGATAATAATTGATATCT 37602
|| || || || ||| || || | | ||| ||||| || || || || ||
Sbjct 22632 ATTGGCCTGTGGCGCTTGTTTGAATTCTCTGCTTCAGGAACTGGGTAGTAGTTAATGTCA 22691
Query 37603 ATTATTTTATTTAGATTTTTAACTAGTATTTTCGTAATTATTCTCAACTTGTCGAA--CA 37660
|| || || || || ||| | || | || ||| || | | ||| | ||| ||
Sbjct 22692 ATGATCTTGTTGAGGTTTCTTACAATTACTTTAGTGACCGAGGCAAGCTTTTTGAAGTCA 22751
Query 37661 TAAATACGTT-ATTATTAACAAATTTACTCAACGAAATAGATCCTAGATTACATACAGCA 37719
| | |||| | ||||| | | | | | ||| || | | ||||| || ||
Sbjct 22752 AAGGTGCGTTCCGGAGTAACATACATGTTGAGAGCAATGGAGGCCAAGTTACAGACGGCC 22811
Query 37720 ACTTCATCTTCGTTACTAAATTGTATAATCTCTGTACAGAGATTACTCGATCTAATTGTT 37779
|||||||||| | | || | | | |||||| || || | ||||| || | || ||
Sbjct 22812 ACTTCATCTTTGCTTGTATACTCCACAATCTCAGTGCACAAGTTACTGCATTTGATGGTG 22871
Query 37780 CCCAAATTGCTTTGATTGGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTT 37839
|||||||| || || || | ||||| | |||||| || | || || || |||
Sbjct 22872 CCCAAATTCTGCTGGTTACTCTTCCTGTTACAGGCATCTTTGTACAACATGTAAGGTGTT 22931
Query 37840 CCTTGTTCTATTTGAGCCTCGATAATAGATTTCCATAAACTTCT-TGCTTTAACGATCGC 37898
||| |||| | |||| |||||| || | | ||| |||| || || || || | |
Sbjct 22932 CCTGTTTCTGTCTGAGACTCGATGATGGCATACCA-CAACTGCTGAGCCTTGACCACCCG 22990
Query 37899 TTTAAtttttttCTTTGTTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATAC 37958
|| | | | || ||| |||| | || | || | ||| || | |||||| ||
Sbjct 22991 CTTCACTCTACCCTCCTGTTCATATTGAGTGTAGAGCTTCTCAAACTCCTCCCCCCA-AC 23049
Query 37959 ATCGCAT--AATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCT 38016
| | ||| || || || || || | || ||||| |||||||| || | | |||||
Sbjct 23050 A-CTCATCCAACCCAGGGCACTCACTGGGGCACATCAGAGACCAGTCCTGGTTGTTTTCC 23108
Query 38017 ACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATAT 38076
|| | | ||| || | |||||| | ||||| ||| || | ||| | || |
Sbjct 23109 ACCCTCTTCATGAACAGATCAGGGATCCATAGGGCATAGAAGAGGTCTCGTGCCCTCTGC 23168
Query 38077 TCTTCGTTCCCTACATTCTTTCTTAAGCT-TAGAAAATCGAATATATCAGCGTGCCATGG 38135
|| || || || ||| ||||| |||| || || || || | |||| |||||||||
Sbjct 23169 TCCTCTTTACCAGTGTTC-TTCTTCAGCTCAAGGAAGTCAAACACATCAAAGTGCCATGG 23227
Query 38136 TTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAAC 38195
|| | || || | | || || |||| ||||| || || || | | || | |
Sbjct 23228 CTCCAGGTATATGGCAAAAGCACCCGGTCGTTTATTGCCACCTTGGTCCACGTAGCGTGC 23287
Query 38196 TGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGA 38255
||||| || || | ||| | ||| || || | ||||| || || || ||| | || |
Sbjct 23288 GGTGTTGTTGTACACTCTCAGCATCGGCACAAGGCCATTTGAGTTACCATTTGTTCCAGC 23347
Query 38256 TATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTT 38315
|| ||| |||| | | || ||| || | | | || || || |||||| |||
Sbjct 23348 AATGTAACTACCTGTTGATCTAATACAGCTAACTGCTACACCAATCCCTCCTGCAGATTT 23407
Query 38316 TGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTAT 38375
|| || | ||| |||||||| | |||||| | || || || || ||||||||||| ||
Sbjct 23408 AGAGATGAGAGCACATTGTTTGAGTGTATCATAAATGCCATCAATGCTGTCATCCTTCAT 23467
Query 38376 TGGTAGTATAAAACAACTAGACATTTGAGG-CAATGGAGTTCCGGCGTTAAATAATGTAG 38434
| || | || || || || | || || | || | || || ||||| || | || |
Sbjct 23468 GGCCAGCAGGAAGCAGCTGGAGAGCTGGGGTCTATTG-GTGCCTGCGTTGAACAGAGTGG 23526
Query 38435 GAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTA 38494
|||| ||||| ||||||| || || |||| || || || || || | ||||||
Sbjct 23527 GAGAGGCATGAGTGAACCACTTCTCAGACAGCAGGTTGTAGGTCTCAATGGCTGCATCTA 23586
Query 38495 TATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTCTATTA 38554
||||| | ||| || || | || ||| ||||| ||||| || ||||| | || |
Sbjct 23587 TATCAGTGTTGTGGATTCCAACAGCTACTCTCATGAGCATGTGCTGTGGGCGCTCAGCCA 23646
Query 38555 TTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAAAATAACTAT 38614
|||| ||| ||| || || || || |||||||| || | ||||| || | |
Sbjct 23647 CTTTACCATTGATTTTCAGCAGGTAGGAGCGCTCTAATGTCTTAAAGCCAAAGAAATTGT 23706
Query 38615 ATGAATAATCTCTATCGTA 38633
| ||| |||| ||||| ||
Sbjct 23707 AAGAAAAATCCCTATCATA 23725
>seq19576
Length=429644
Score = 98.7 bits (108), Expect = 9e-16
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713
|| ||||| || || |||||||| ||| | || | || ||||| | || | |||||
Sbjct 417019 TCATCTCTGCTGATAAGTTCATTGGAATAAGTAAGCCCAGGCATTAGACCCCTCTTTTTC 416960
Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773
| |||| | || || ||||| || ||||| ||||| |||||||| ||||||||||||||
Sbjct 416959 AGCCAATAAATGGCGGCAAAGGATCCAGAGAAGAAAATTCCCTCTACAGCTGCAAATGCC 416900
Query 11774 ACTACTCTTTCTCC 11787
|| | |||||| ||
Sbjct 416899 ACAATTCTTTCACC 416886
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468251521197280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |