Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014- 12-02] 46,662 sequences; 679,761,122 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq18834 178 9e-40 >seq18834 Length=47866 Score = 178 bits (196), Expect = 9e-40 Identities = 236/324 (73%), Gaps = 8/324 (2%) Strand=Plus/Plus Query 91799 CATTTCCCTGTCTTTTCCTGCAAAGAGGACTACAACATCATCATGGACACTGTCAGACAA 91858 |||||||| ||||| ||||| |||||||||| ||||||||| |||||| | || || Sbjct 9419 CATTTCCCAGTCTTCTCCTGTAAAGAGGACTGTGACATCATCACGGACACGG-CATCTAA 9477 Query 91859 -CTGGAACAAAGTGGCTTCTACTGGGGTCCTTTGGGGGTCGAGGAGGCACATCGTATGCT 91917 ||||| | ||||| ||||||||||||||| |||| || |||||||| || || || Sbjct 9478 GCTGGAGCGCAGTGGATTCTACTGGGGTCCTCTGGGTGTGGAGGAGGCTCACCG---CCT 9534 Query 91918 GCGCAACTCGG---CACTGGGCAGCTTTCTCATTCGGGATAGCAGGCAAAAGGACGTCTT 91974 || ||| || | |||||||| ||||| || || || ||| | || |||||||| || Sbjct 9535 GCTCAAAGAGGCTCCTCTGGGCAGTTTTCTGATCCGAGACAGCCGTCAGAAGGACGTGTT 9594 Query 91975 GTTCACGCTGTCGTATCACTCTGTGACCGGACCCGTCAGTGTGAGGATTGAATACAAGGA 92034 ||||| ||||| || ||||| || || || ||||||||| | || || |||||| | Sbjct 9595 CTTCACTCTGTCCTACCACTCCAAGAGTGGCCCGGTCAGTGTGCGCATCGATTACAAGAA 9654 Query 92035 CAAGCAATTTTCCTTGGCTGGGAGCAAACAGAGGTTTTCATCGGTCCTTCTCCTGTTGGA 92094 | || || ||| ||||||| | | | | || ||||| || || || ||||| Sbjct 9655 GCACCAGTTCTCCCTGGCTGGAAACGAGCGCTCCTTCCCATCGCTCTTTGCTCTATTGGA 9714 Query 92095 CCATTACATCGGTGGGCCCAATAA 92118 ||||||||| | |||||| || Sbjct 9715 ACATTACATCAGCTCGCCCAAGAA 9738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356031012400786