Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq11038 652 0.0
seq15624 125 1e-23
>seq11038
Length=78219
Score = 652 bits (722), Expect = 0.0
Identities = 1361/2014 (68%), Gaps = 38/2014 (2%)
Strand=Plus/Plus
Query 71049 CTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATTCCATAATTTTCT 71108
||| ||||||||| | ||||| ||| |||| || ||||| || ||||| | |
Sbjct 22133 CTGTATGGATCCATTTTGAGCAATGATCTTATTCTTCATCTCCTCGTTCCACAGCCCCCG 22192
Query 71109 CTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCCAGACAATACTCT 71168
|| || | | | || ||||| || || || | ||||| |||||||| | |||||
Sbjct 22193 TTCAGTGAGGTCCTTCAGCAGATGTGGGTTTACAATCTGAAACTCTCCAGAGAGGACTCT 22252
Query 71169 ACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGC 71228
||| ||||| || || ||||| || | ||| | |||||||| || || | ||||| ||
Sbjct 22253 ACGTGTGTAGATGTTGCTGGTGTAGGCTTCGATGGACTCATTGTTGCCGAGTATTTGTGC 22312
Query 71229 AGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACCATGTGATCGGAT 71288
|| || || || ||||| || |||| ||| ||||| ||||| | ||| ||| ||
Sbjct 22313 TGTGGAGGCTGTGGGCATGGGGGCCAACAACAGACTGTTTCTCACACCGTGTTTAGCAAT 22372
Query 71289 TTTATCTTTTAG-AGATTCCCAATTCCAAAGATCCGATGGTACAACNNNNNNNNNNNNNN 71347
|| || || || || |||| | | ||| || || | || ||
Sbjct 22373 CTTCTCCTTAAGCAGCTTCC-AGTCCCAGAGCTCAGTGGGCACCTTTTCCCACATGTCAT 22431
Query 71348 NNNNNNNNATGCCGTTACTAGCGTATGATCCTGCATATGTATCGTATGGTCCTTCTTTTT 71407
||||| |||| | || |||| ||||| || || || || |||||||
Sbjct 22432 ACTGCAGAATGCCTCTACTCACTGGAGAGCCTGGGTATGTCTCATAAGGCCCATCTTTTT 22491
Query 71408 CGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTTAT 71467
| || | || || || ||||| | || |||| || ||||| || || |||| |||
Sbjct 22492 CTGCCAACTCCCAGCTTGCCTCCAGGGCAGCATAGTAGATGGTCTCAAAGATCTGGATAT 22551
Query 71468 TGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTA 71527
| || || ||||| ||||| |||||||||||| | ||| || || || ||||| |
Sbjct 22552 TCAGCAGCTGGGCTTCAGGGCTTTCAAATGGATAACGCATGAGGATGAAGGCATCTGCAA 22611
Query 71528 ATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAA 71587
|| || || ||||| ||||| || ||||| | ||| || ||| | || ||||| ||||
Sbjct 22612 GACCCTGCACACCAATCCCGATTGGCCTGTGGCGCTTGTTTGAATTCTCTGCTTCAGGAA 22671
Query 71588 TAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACTATTACTTT---GACCA 71644
|| || || ||||| || || || || ||||| ||||| || |||||||| ||||
Sbjct 22672 CTGGGTAGTAGTTAATGTCAATGATCTTGTTGAGGTTTCTTACAATTACTTTAGTGACCG 22731
Query 71645 ---CATCCTTTAGTTTGAGAAAATCAAATCTCCCATCTA---TTACAAACACGTTCAAGG 71698
|| |||| |||| | ||||| | | || | ||| ||| ||| | |
Sbjct 22732 AGGCAAGCTTT---TTGA---AGTCAAAGGTGCGTTCCGGAGTAACATACATGTTGAGAG 22785
Query 71699 CAACAGATGCCAGATTACAAACGGCTACCTCAT--TAGCATCGGCATATTGTATAATTTC 71756
||| || |||| ||||| ||||| || |||| | || | | ||| | | ||| ||
Sbjct 22786 CAATGGAGGCCAAGTTACAGACGGCCACTTCATCTTTGCTT--GTATACTCCACAATCTC 22843
Query 71757 AGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACA 71816
|||||| | ||||| || |||||||| || ||||| || || |||||||| |||||||
Sbjct 22844 AGTGCACAAGTTACTGCATTTGATGGTGCCCAAATTCTGCTGGTTACTCTTCCTGTTACA 22903
Query 71817 CGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTT 71876
||||| || || | || | || || || ||||| ||||||| || || || || |
Sbjct 22904 GGCATCTTTGTACAACATGTAAGGTGTTCCTGTTTCTGTCTGAGACTCGATGATGGCATA 22963
Query 71877 CCAGA-CGACTCGAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTATTGTGTAT 71935
||| | | || ||||||| | | ||| ||| || ||| ||||| || |
Sbjct 22964 CCACAACTGCT-GAGCCTTGACCACCCGCTTCACTCTACCCTCCTGTTCATATTGAGTGT 23022
Query 71936 ATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACA 71995
| | || ||||| || |||||| | || || ||||| || ||| | || ||||
Sbjct 23023 AGAGCTTCTCAAACTCCTCCCCCCAACACTCATCCAACCCAGGGCACTCACTGGGGCACA 23082
Query 71996 TCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 72055
||| ||||| || | | | || | ||||| || |||||||| ||||| || |
Sbjct 23083 TCAGAGACCAGTCCTGGTTGTTTTCCACCCTCTTCATGAACAGATCAGGGATCCATAGGG 23142
Query 72056 CTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGG 72114
| ||| || || |||| | || |||||||| || || || ||||| || || || |||
Sbjct 23143 C-ATAGAAGAGGTCTCGTGCCCTCTGCTCCTCTTTACCAGTGTTCTTCTTCAGCTCAAGG 23201
Query 72115 AACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTG 72174
|| | | | |||| | ||||| || |||| ||||||||| | | | ||||| |||||
Sbjct 23202 AAGTCAAACACATCAAAGTGCCATGGCTCCAGGTATATGGCAAAAGCACCCGGTCGTTTA 23261
Query 72175 TTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATA 72234
|| || || || || | ||| | |||||||| || || ||||||| ||| || | ||
Sbjct 23262 TTGCCACCTTGGTCCACGTAGCGTGCGGTGTTGTTGTACACTCTCAGCATCGGCACAAGG 23321
Query 72235 CCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATT 72294
||||| || |||||| || || | || || || || | | | |||| ||||| |
Sbjct 23322 CCATTTGAGTTACCATTTGTTCCAGCAATGTAACTACCTGTTGATCTAATACAGCTAACT 23381
Query 72295 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAG 72354
| || ||| || || ||||| ||||||||| | || ||| |||| | ||||||||
Sbjct 23382 GCTACACCAATCCCTCCTGCAGATTTAGAGATGAGAGCACATTGTTTGAGTGTATCATAA 23441
Query 72355 ATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA 72414
||||| || || || |||||| ||||| || || || ||||| || | ||| | | |
Sbjct 23442 ATGCCATCAATGCTGTCATCCTTCATGGCCAGCAGGAAGCAGCTGGAGAGCTGGGGTCTA 23501
Query 72415 CTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGA 72474
| || || || || || | || ||||| || || || ||||| || |||||||| ||
Sbjct 23502 TTGGTGCCTGCGTTGAACAGAGTGGGAGAGGCATGAGTGAACCACTTCTCAGACAGCAGG 23561
Query 72475 TTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGT--ATTCCTACCGCGACACGCA 72532
||||| |||||||| |||| |||||||| | || ||| ||||| || || || | ||
Sbjct 23562 TTGTAGGTCTCAATGGCTGCATCTATATC--AGTGTTGTGGATTCCAACAGCTACTCTCA 23619
Query 72533 TTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTT 72592
| | ||| ||||| || | ||| | | || ||| ||||||| || |||||| |
Sbjct 23620 TGAGCATGTGCTGTGGGCGCTCAGCCACTTTACCATTGATTTTCAGCAGGTAGGAGCGCT 23679
Query 72593 CCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAAT 72652
| || || ||||| ||||| | ||||| ||||| || | || ||||| ||| | || |
Sbjct 23680 CTAATGTCTTAAAGCCAAAGAAATTGTAAGAAAAATCCCTATCATAAATTATAGCAGAGT 23739
Query 72653 TGAGTTTATCCTTATATTTGTTA--ACTATATCCATGGTGATACTTG--AAATAATCGGA 72708
|||| || || | ||| | || ||||| | ||| |||| | || || ||
Sbjct 23740 TGAGGCGGTCTTTGT--TTGCAAGGACAATATCTAGGGTCT--CTTGGGAGATCATGGGG 23795
Query 72709 GAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAAT 72768
|| || | |||| |||||| ||||||| ||| | ||||||||| || ||||| ||
Sbjct 23796 GAGTGGCGCTTATTTAAAGGATTGACATAGTGGAACAGATCCTCCATGACATCACTGAAC 23855
Query 72769 AGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAA 72828
| || || || || || || || || || || || || | || || || |||||||||
Sbjct 23856 ACCTTCTTGGTCTCTTTATGGAGGTTGGACACAGCAATCCGTGCAGCCAGGATGGCATAA 23915
Query 72829 TCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTACC 72888
||||| || | || || ||||| || || ||||| || || |||||||| || ||
Sbjct 23916 TCTGGGTGCTTCGTGGTCAGTGTGGCAGCAATCTCTGCAGCAAGTGTGTCCAACTCCACA 23975
Query 72889 GTTGTTACTCCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATA 72948
|| || ||||| | || | |||||||| |||||||| | |||| | || || | |
Sbjct 23976 GTGGTCACTCCGCTGTACAGACCTTGGATCACCTTCATCGTGATTTGTGTGGGGTCCACA 24035
Query 72949 TGATCAGTGTTTAAGCCATAACATAATTTTCTAATACGAGACGTGATTTTATCAAACATA 73008
|| | || | |||||||| | || || ||||| |||||||||||||||||
Sbjct 24036 AACTCTGCATTGAGCCCATAACAGAGCTTCTGGATTCGAGAGGTGATTTTATCAAACATG 24095
Query 73009 ACATTTTCCCGGCATCCATTTCGTTTAACGACAA 73042
|| ||| ||| ||||| | | ||||||||
Sbjct 24096 ACGCGCTCCTGGCGTCCATCT-GAAAAACGACAA 24128
>seq15624
Length=12484
Score = 125 bits (138), Expect = 1e-23
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 71374 GATCCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAAT 71433
|| || |||||||| || || ||||| |||| | ||||||||||| || ||||| ||
Sbjct 11336 GAGCCAGCATATGTTTCATAAGGTCCATCTTGGGCAGCTAGTTCACAGCTGGCCTCCAAA 11395
Query 71434 GCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCA 71493
|| ||||||||||||| || ||||||| | ||||||| || || | || ||
Sbjct 11396 GCAGCATAATAAATGGTCTCAAAAATCTGGATGTTGAGATGCTGGGCCTTTTCACTTTCG 11455
Query 71494 AATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGT 71553
||||||||| | |||||| || ||||| || | || ||||| ||||| || ||||||
Sbjct 11456 AATGGATAACGCATGAGAATGAAGGCGTCCGCAAGACCCTGAACACCAATCCCAATAGGT 11515
Query 71554 CTGTGTCTCTTATTAGA 71570
||||| | | | |||||
Sbjct 11516 CTGTGGCGCATGTTAGA 11532
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 670747741283120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |