Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq11038 140 5e-28
>seq11038
Length=78219
Score = 140 bits (154), Expect = 5e-28
Identities = 349/525 (66%), Gaps = 24/525 (5%)
Strand=Plus/Minus
Query 96806 AACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACG 96865
|||||| || ||| | | |||||| ||||| ||||| ||| ||||||| | ||||
Sbjct 23342 AACAAATGGTAACTCAAATGGCCTTGTGCCGATGCTGAGAGTGTACAACAACACCGCACG 23283
Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925
||||| || || ||||||||||| || || ||| | ||| | ||| |||| || ||
Sbjct 23282 CTACGTGGACCAAGGTGGCAATAAACGACCGGGTGCTTTTGCCATATACCTGGAGCCATG 23223
Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCAC- 96984
|||| || || |||||||| | ||| || || ||| |||| | |||||| |
Sbjct 23222 GCACTTTGATGTGTTTGACTTCCTTGAGCTGAAGAAGAACACTGG---TAAAGAGGAGCA 23166
Query 96985 --GAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGT--- 97039
| || | ||| | || ||||| || ||| | || ||| ||||||||||| | ||
Sbjct 23165 GAGGGCACGAGACCTCTTCTATGCCCTATGGATCCCTGATCTGTTCATGAAGAGGGTGGA 23106
Query 97040 CAACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTG 97099
||| || | ||||| || ||||||||| || || || || || ||
Sbjct 23105 AAACAACCAGG---ACTGGTCTCTGATGTGCCCCAGTGAGTGCCCTGGGTTGGATGAGTG 23049
Query 97100 CTGGGGCGAAGAGTTTGAGGCCAAG---TACACGGCCTACGAGCAAGAGGGCCGATACGT 97156
||||| || ||||||||| ||| ||||| || || || ||||| || ||
Sbjct 23048 TTGGGGGGAGGAGTTTGAG---AAGCTCTACACTCAATATGAACAGGAGGGTAGA---GT 22995
Query 97157 GAGACG---AGTCGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGAC 97213
|| || ||| | || | | ||||| | |||||| | | ||||| ||| ||
Sbjct 22994 GAAGCGGGTGGTCAAGGCTCAGCAGTTGTGGTATGCCATCATCGAGTCTCAGACAGAAAC 22935
Query 97214 TGGAACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTT 97273
||||| || ||||| | ||||| ||| || || | || || ||||| | | ||
Sbjct 22934 AGGAACACCTTACATGTTGTACAAAGATGCCTGTAACAGGAAGAGTAACCAGCAGAATTT 22875
Query 97274 GGGCACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTA 97318
|||||||||||| || || ||||||| || ||||| |||||
Sbjct 22874 GGGCACCATCAAATGCAGTAACTTGTGCACTGAGATTGTGGAGTA 22830
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740626958695120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |