Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_006150.1
Length=221454
Score E
Sequences producing significant alignments: (Bits) Value
seq38854 123 4e-23
seq7084 111 2e-19
seq14925 91.5 2e-13
>seq38854
Length=59830
Score = 123 bits (136), Expect = 4e-23
Identities = 167/233 (72%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 8705 ACGTTGCTACAGACTAGAGACTGGATAGTTGCACTCTTGACGATCCCAAACCCCACGTCT 8764
|||||| | || ||||| ||| | | || | |||| ||| | || ||||| |
Sbjct 59644 ACGTTGTTGCACACTAGCTTCTGCAGCGAGGCCGTGTTGATGATGTCGAAGCCCACCTGG 59585
Query 8765 CCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAGCAGATGACGTTCGCCATGAGGCCT 8824
|| ||||| ||||| || ||||| || | |||||||||||| |||| |||||||||||
Sbjct 59584 CCTCCGAAAGTGCTTGGCTTCCAATATTCAGGGGAGCAGATGGCGTTTCCCATGAGGCCT 59525
Query 8825 TTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGG 8884
|||||||| || || || |||| || | ||| |||| ||||| ||||| | | | |
Sbjct 59524 TTGAGGGAGAAGGGGGCGCCCATTTCAACCATGGTCTCCCCGAAAATGGCATCCTGTCTG 59465
Query 8885 GGCTTTTCCACCAAGAATCCGGTGTACAACTCCACAGCCTCGATGTCTCCGTA 8937
||||| || |||| | || | ||||| |||||| || || | || ||| ||
Sbjct 59464 GGCTTCTCGACCAGCAGACCCGGGTACAGCTCCACGGCGTCCACGTGTCCATA 59412
Score = 98.7 bits (108), Expect = 1e-15
Identities = 131/181 (72%), Gaps = 1/181 (1%)
Strand=Plus/Minus
Query 9671 CTCGTTTCAGAACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATCA 9730
||| ||| || ||||| || || | |||||| || | |||||||| |||||||||||||
Sbjct 56599 CTCCTTT-AGCACATCACATACGCGGTTGTGCTCACGCAGCCAGATCGTAGCGTACATCA 56541
Query 9731 TGAGACCAGGCACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATATTTTCGGGCA 9790
|||| ||||| ||||||||||| || || ||||| || || | ||| || || |
Sbjct 56540 TGAGTCCAGGGACCAGGCCAAAGGCTTCGTGACCCACTGCAAACCGCTGGGACTCTGGGA 56481
Query 9791 CTTCGGGAGGATAGATCATGTGCACCTGGACATCTTTGACCGAGGGGGGATACATTTCAC 9850
| | || || ||| ||||| ||| || || || || | |||||||||| ||||
Sbjct 56480 CGTGAGGGGGGTAGTGCATGTCCACACCAACCTCCTTCACTGTCGGGGGATACACCTCAC 56421
Query 9851 C 9851
|
Sbjct 56420 C 56420
>seq7084
Length=102118
Score = 111 bits (122), Expect = 2e-19
Identities = 177/254 (70%), Gaps = 0/254 (0%)
Strand=Plus/Plus
Query 8691 ACGGACACCCTTTGACGTTGCTACAGACTAGAGACTGGATAGTTGCACTCTTGACGATCC 8750
||||||||| ||| || ||| ||||| || | ||||||||| ||||||| |
Sbjct 52284 ACGGACACCATTTTGAATTTTGACACACTAGTTTTTGCAGAGTTGCACTTTTGACGACCT 52343
Query 8751 CAAACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAGCAGATGACGT 8810
||| || ||||| || || || ||||| |||||||| |||||||||||| | |
Sbjct 52344 GAAAGCCTGTCTCTCCTCCAAATGTACTGGGCTTCCAGTACTCCGGGGAGCAGAGGGGAT 52403
Query 8811 TCGCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTCTCACCGAAGA 8870
| ||| | ||||| || ||||| ||||| |||| ||| | || ||||| || ||||
Sbjct 52404 TTCCCAGCAAACCTTTTAGAGAAAAAGGAGCGCCCATCTCCACCATACTCTCCCCAAAGA 52463
Query 8871 TGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCACAGCCTCGATGT 8930
|||| || || | || |||| || | || | || ||||||| ||| || || |
Sbjct 52464 TGGCTCCTGGCCGCGTTTTCTCCAGCATCACACCTGAATAAAACTCCAGAGCGTCTATAT 52523
Query 8931 CTCCGTAAAGGGCC 8944
| || |||||| ||
Sbjct 52524 CCCCATAAAGGTCC 52537
>seq14925
Length=171059
Score = 91.5 bits (100), Expect = 2e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 8732 GTTGCACTCTTGACGATCCCAAACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAA 8791
|||||| || || || |||| || || | || || || ||||| |||||||||||
Sbjct 58518 GTTGCAGAATTCACTATGTCAAATCCAACTTTGCCTCCAAATGTGCTTGGTTTCCAGTAC 58577
Query 8792 CCCGGGGAGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCG 8851
|| || || ||| |||| ||| || ||||| |||||||| |||||||||| |||
Sbjct 58578 ATGGGAGAACATATGGGGTTCCCCAATAGTCCTTTCAGGGAAAAGGGAGCCCCCATCTCC 58637
Query 8852 AGAATGCTCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTAC 8911
| |||||||| || || || || ||||| | || |||| ||||| || | ||
Sbjct 58638 ACCATGCTCTCTCCAAATATTGCTCCTGGACGCGTTTTCTCCAACAAGAGACCAGGATAA 58697
Query 8912 AACTCCACAGCCTCGATGTCTCC 8934
|| || | ||| | ||||| ||
Sbjct 58698 AATTCAAGAGCATTTATGTCACC 58720
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 708111535197280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |