Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq27510 113 4e-20
seq31826 86.0 6e-12
>seq27510
Length=34911
Score = 113 bits (124), Expect = 4e-20
Identities = 164/230 (71%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 94780 TCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCT 94839
|||||||||||| |||| ||||||||| | || |||||||| || | ||| || ||
Sbjct 29907 TCCTCCTCTCAAACGCAGCACCAAGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCAG- 29965
Query 94840 CATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGA 94897
| || || || ||| || ||||| || || | || || | || ||||| || |||
Sbjct 29966 -AGAGGGTGCGACCATCTTCAAGCTGCTTACCAGCGAAAATCAGCCTCTGCTGGTCAGGA 30024
Query 94898 GGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCG 94957
|| ||||| |||||||| | || ||||||||||| | | |||||| | ||
Sbjct 30025 GGGATACCCTCTTTGTCCTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTAGGTTCC 30084
Query 94958 ACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || | |||||||| || ||||| || || |||||||| || |||||
Sbjct 30085 ACTTCCAAAGTGATGGTCTTCCCAGTCAGGGTCTTCACAAAAATTTGCAT 30134
Score = 109 bits (120), Expect = 5e-19
Identities = 168/240 (70%), Gaps = 0/240 (0%)
Strand=Plus/Plus
Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827
|||| ||| || |||||||||| || | ||||||||| | || || ||||| || |
Sbjct 30123 AAAAATTTGCATCCCTCCTCTCAGACGTAGCACCAAGTGGAGGGTGGACTCCTTCTGGAT 30182
Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887
||| || || | |||| | ||| || || || || || |||| || | || ||
Sbjct 30183 GTTGTAGTCAGAGAGAGTGCGGCCATCTTCTAGTTGCTTACCAGCAAAAATCAGCCTCTG 30242
Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947
||| || ||||| |||||||| || || | || || ||||| ||| | | |||||
Sbjct 30243 CTGGTCAGGAGGGATACCTTCCTTATCTTGGATCTTGGCCTTCACGTTTTCAATTGTGTC 30302
Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| | || || || | ||||||||||| ||||| || || || ||||||||||||||
Sbjct 30303 ACTCGGCTCAACTTCCAAAGTGATGGTTTTACCAGTCAGGGTCTTAACAAAGATCTGCAT 30362
>seq31826
Length=1572
Score = 86.0 bits (94), Expect = 6e-12
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 94883 CTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACA 94942
|| ||||||||||| ||||| || || || || | ||| || || || || | | |
Sbjct 5 CTCTGCTGATCTGGGGGAATGCCCTCCTTATCTTGAATCTTGGCTTTAACATTTTCAATA 64
Query 94943 GTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATC 95002
|||||| | | || || |||| || |||||||| ||||| || |||||||||||||||
Sbjct 65 GTGTCACTGGGCTCCACCTCAAGGGTAATGGTTTTGCCAGTGAGGGTTTTCACAAAGATC 124
Query 95003 TGCAT 95007
|||||
Sbjct 125 TGCAT 129
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448029722950320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |