Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq45291 172 9e-39
seq11083 168 1e-37
seq31010 165 1e-36
seq34580 154 2e-33
seq24136 154 2e-33
seq13138 150 3e-32
seq964 143 4e-30
seq10525 136 6e-28
seq28053 132 8e-27
seq11233 105 1e-18
>seq45291
Length=9472
Score = 172 bits (190), Expect = 9e-39
Identities = 199/268 (74%), Gaps = 0/268 (0%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|||||||||||| || | | || || ||||||||||| || ||||| ||||| |||||
Sbjct 857 CGCTAAGCGTCACCGTAAAGTGCTCCGTGATAACATCCAGGGCATCACTAAGCCCGCTAT 916
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||||||||| ||||| || || |||||| |||| || || |||| || ||||
Sbjct 917 CCGCCGTCTGGCTCGCCGTGGCGGTGTGAAGCGTATCTCCGGTCTGATCTACGAGGAGAC 976
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
||| | ||| | ||| | |||||| ||| ||| |||| ||| || || ||| |||||
Sbjct 977 TCGCGGTGTGCTCAAGGTTTTCCTCGAGAACGTGATCCGTGACGCCGTCACCTACACCGA 1036
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| || ||| ||||||| | || || || |||| | || ||
Sbjct 1037 GCACGCCAAGAGGAAGACCGTGACCGCCATGGACGTGGTGTACGCTCTGAAGAGACAGGG 1096
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| | | || || |||||| | |||
Sbjct 1097 CCGCACTCTGTACGGCTTTGGAGGCTAA 1124
>seq11083
Length=6744
Score = 168 bits (186), Expect = 1e-37
Identities = 198/268 (74%), Gaps = 0/268 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| |||||||| || | | || || ||||||||||| || ||||||||||| |||||
Sbjct 6046 CGCCAAGCGTCACCGTAAAGTGCTCCGTGATAACATCCAGGGTATCACCAAGCCCGCTAT 5987
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||||||||| ||||| || || |||||| ||||||| || |||| || ||||
Sbjct 5986 CCGCCGTCTGGCTCGCCGTGGCGGTGTGAAGCGTATCTCTGGTCTGATCTACGAGGAGAC 5927
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | |||| | ||| | || || ||| ||| |||| ||| || || ||| || ||
Sbjct 5926 CCGCGGTGTTCTCAAGGTTTTTCTGGAGAACGTGATCCGTGACGCCGTCACCTACACTGA 5867
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | |||||||| ||| |||||||| | || || || |||| | || ||
Sbjct 5866 ACACGCCAAGAGGAAGACTGTGACCGCCATGGATGTGGTGTACGCTCTGAAGAGACAGGG 5807
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
|| | | || ||||| ||| |||||
Sbjct 5806 ACGCACTCTGTACGGTTTCGGAGGTTAA 5779
>seq31010
Length=2226
Score = 165 bits (182), Expect = 1e-36
Identities = 199/271 (73%), Gaps = 0/271 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| |||||||| || | | || || ||||||||||| || ||||| ||||| |||||
Sbjct 895 CGCCAAGCGTCACCGTAAAGTGCTCCGTGATAACATCCAGGGCATCACTAAGCCCGCTAT 836
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||||||||| ||||| || || |||||| |||| || || |||| || ||||
Sbjct 835 CCGCCGTCTGGCTCGCCGTGGCGGTGTGAAGCGTATCTCCGGTCTGATCTACGAGGAGAC 776
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
||| | ||| | || | |||||| ||| ||| |||| ||| || || ||| |||||
Sbjct 775 TCGCGGTGTGCTCAAAGTTTTCCTCGAGAACGTGATCCGTGACGCCGTCACCTACACCGA 716
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| || ||| ||||||| | || || || |||| | || ||
Sbjct 715 GCACGCCAAGAGGAAGACCGTGACCGCCATGGACGTGGTGTACGCTCTGAAGAGACAGGG 656
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCT 16702
||| | | || || || ||| ||||| ||
Sbjct 655 CCGCACTCTGTACGGCTTCGGAGGTTAAGCT 625
>seq34580
Length=576
Score = 154 bits (170), Expect = 2e-33
Identities = 195/268 (73%), Gaps = 0/268 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|||||||||||| || | | ||| || ||||||||||| || ||||||||||| |||||
Sbjct 469 CGCTAAGCGTCACCGTAAAGTTCTCCGTGATAACATCCAGGGCATCACCAAGCCCGCTAT 410
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||||||||| || || || || |||||| |||| || || |||| || ||||
Sbjct 409 CCGCCGTCTGGCTCGCCGCGGCGGTGTGAAGCGTATCTCCGGTCTGATCTACGAGGAGAC 350
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | || | || | ||||| ||| ||| |||| ||| || || || |||||
Sbjct 349 CCGCGGAGTGCTCAAAGTTTTCCTGGAGAACGTGATCCGTGACGCCGTCACGTACACCGA 290
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| || ||| ||||||| | || || || |||| | || ||
Sbjct 289 GCACGCCAAGAGAAAGACCGTGACCGCCATGGACGTGGTGTACGCCCTGAAGAGACAGGG 230
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| | | || || || ||| |||||
Sbjct 229 CCGCACTCTGTACGGCTTCGGAGGTTAA 202
>seq24136
Length=5854
Score = 154 bits (170), Expect = 2e-33
Identities = 195/268 (73%), Gaps = 0/268 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| |||||||| || | | |||||| ||||||||||| || ||||| ||||| |||||
Sbjct 4279 CGCCAAGCGTCACCGTAAAGTTCTTCGTGATAACATCCAGGGCATCACTAAGCCCGCTAT 4220
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||||||||| || || || || |||||| | || || || |||| || ||||
Sbjct 4219 CCGCCGTCTGGCTCGCCGCGGCGGTGTGAAGCGTATTTCCGGTCTGATCTACGAGGAGAC 4160
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
||| | || | ||| | ||||| ||| ||| |||| ||| || || ||| || ||
Sbjct 4159 TCGCGGAGTGCTCAAGGTTTTCCTGGAGAACGTGATCCGTGACGCCGTCACCTACACTGA 4100
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| || || ||||||| | || || || |||| | || ||
Sbjct 4099 GCACGCAAAGAGAAAGACCGTGACTGCCATGGACGTGGTGTACGCCCTGAAGAGACAGGG 4040
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| | | || ||||| ||| |||||
Sbjct 4039 CCGCACTCTGTACGGTTTCGGAGGTTAA 4012
>seq13138
Length=12877
Score = 150 bits (166), Expect = 3e-32
Identities = 193/266 (73%), Gaps = 0/266 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| |||||||| || | | ||| || ||||||||||| || ||||||||||| || ||
Sbjct 2705 CGCCAAGCGTCACCGTAAAGTTCTCCGTGATAACATCCAGGGTATCACCAAGCCCGCCAT 2646
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||||||||| || || || || |||||| |||| || ||| |||| || ||||
Sbjct 2645 CCGCCGTCTGGCTCGCCGCGGCGGTGTGAAGCGTATCTCCGGTTTGATCTACGAGGAGAC 2586
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | || | || | ||||| ||| ||| |||| ||| || || || |||||
Sbjct 2585 CCGCGGAGTGCTCAAAGTTTTCCTGGAGAACGTGATCCGTGACGCCGTCACGTACACCGA 2526
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| || ||| ||||||| | || || || |||| | || ||
Sbjct 2525 GCACGCCAAGAGAAAGACCGTGACCGCCATGGACGTGGTGTACGCCCTGAAGAGACAGGG 2466
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTT 16697
||| | | || ||||| ||| |||
Sbjct 2465 CCGCACTCTGTACGGTTTCGGAGGTT 2440
>seq964
Length=223
Score = 143 bits (158), Expect = 4e-30
Identities = 157/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 16436 AAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGT 16495
|||||||| || | | ||| || || || |||||||| ||||| ||||| || ||||||
Sbjct 2 AAGCGTCACCGTAAAGTTCTCCGTGACAATATCCAAGGCATCACTAAGCCGGCCATCCGT 61
Query 16496 CGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGT 16555
|| ||||| |||||||| ||||| ||||| |||| || | ||||||| |||| ||||
Sbjct 62 CGCCTGGCGCGTCGTGGCGGAGTAAAGCGCATCTCCGGTCTCATCTATGAGGAGACTCGT 121
Query 16556 GATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCAC 16615
| || | ||| | ||||| ||| ||| |||| || || || || |||||||||
Sbjct 122 GGCGTGCTTAAGGTTTTCCTGGAGAACGTGATCCGCGACGCCGTCACTTACACCGAGCAC 181
Query 16616 GCTAAACGTAAGACTGTCACCTCCATGGA 16644
|| || | |||||||| ||| |||||||
Sbjct 182 GCAAAGAGGAAGACTGTGACCGCCATGGA 210
>seq10525
Length=65857
Score = 136 bits (150), Expect = 6e-28
Identities = 191/268 (71%), Gaps = 0/268 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| |||||||| || | | |||||| ||||||||||| || || || || || |||||
Sbjct 3072 CGCCAAGCGTCACCGTAAAGTTCTTCGTGATAACATCCAGGGTATTACTAAACCCGCTAT 3013
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| |||||||||| || ||||| || |||||| |||| || || |||| || ||||
Sbjct 3012 CGCCGGTCTGGCTCGCCGCGGTGGCGTGAAGCGTATCTCCGGTCTGATCTACGAGGAGAC 2953
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
||| | || | ||| | ||||| ||| ||| |||| ||| || || ||| || ||
Sbjct 2952 TCGCGGAGTGCTCAAGGTTTTCCTGGAGAACGTGATCCGTGACGCCGTCACCTACACTGA 2893
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| || || ||||||| | || || || |||| | || ||
Sbjct 2892 GCACGCAAAGAGAAAGACCGTGACTGCCATGGACGTGGTGTACGCCCTGAAGAGACAGGG 2833
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| | | || || || ||| |||||
Sbjct 2832 CCGCACTCTGTACGGCTTCGGAGGTTAA 2805
>seq28053
Length=77842
Score = 132 bits (146), Expect = 8e-27
Identities = 190/268 (71%), Gaps = 0/268 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| |||||||| || | | ||| || ||||| |||||||| |||||||| || || ||
Sbjct 69982 CGCCAAGCGTCACCGTAAAGTTCTCCGCGATAATATCCAAGGCATCACCAAACCCGCCAT 69923
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| | ||||| || || ||||| || |||||| |||| || || |||| || ||||
Sbjct 69922 CCGCAGACTGGCGCGCCGCGGTGGTGTGAAGCGTATCTCCGGTCTGATCTACGAGGAGAC 69863
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
||||| || | ||| | ||||| ||| ||| |||| || || || || |||||
Sbjct 69862 TCGTGGAGTGCTTAAGGTTTTCCTTGAGAACGTGATCCGCGACGCAGTCACTTACACCGA 69803
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| || ||| | |||||| | || || || | || | || ||
Sbjct 69802 GCACGCCAAGAGGAAGACCGTGACCGCTATGGATGTAGTGTACGCGCTTAAGAGGCAGGG 69743
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
|| | | || || || ||| |||||
Sbjct 69742 TCGCACTCTGTACGGCTTCGGAGGTTAA 69715
>seq11233
Length=37889
Score = 105 bits (116), Expect = 1e-18
Identities = 169/243 (70%), Gaps = 0/243 (0%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| |||| ||| || | | ||| || ||||||||||| || ||||||||| | ||||
Sbjct 1153 CGCCAAGCATCACCGTAAAGTTCTCCGTGATAACATCCAGGGCATCACCAAGACCACTAT 1212
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| |||||||||| | || || |||||| |||| | || ||| || ||||
Sbjct 1213 CTACCGTCTGGCTCACCACGGCAATGTGAAGCGTATCTCCAGTCTGACCTACGAGGAGAC 1272
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
||||| || | ||| | ||| | ||| ||| |||| ||| || ||| ||| || ||
Sbjct 1273 TCGTGGAGTGCTCAAGGTTTTCTTGGAGAACGTGATCCGTGACGCCTTCACCTACACTGA 1332
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||| || || | ||||| || || ||||||| || || || || ||||| || ||
Sbjct 1333 GCATGCAAAGAGAAAGACCGTAACTGCCATGGACATAGTGTACGCCCTGAAAAAACAGGG 1392
Query 16672 CCG 16674
|||
Sbjct 1393 CCG 1395
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79032536606766
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