Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq11038 616 2e-171
seq15624 120 4e-22
seq3431 84.2 3e-11
seq19576 82.4 1e-10
>seq11038
Length=78219
Score = 616 bits (682), Expect = 2e-171
Identities = 1332/1981 (67%), Gaps = 35/1981 (2%)
Strand=Plus/Plus
Query 62243 CTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCT 62302
||| ||||||||| | || || ||| ||||||| ||||| || ||||| | |
Sbjct 22133 CTGTATGGATCCATTTTGAGCAATGATCTTATTCTTCATCTCCTCGTTCCACAGCCCCCG 22192
Query 62303 CTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCT 62362
|| || | | | || ||||| || || || | ||||| |||||||| | |||||
Sbjct 22193 TTCAGTGAGGTCCTTCAGCAGATGTGGGTTTACAATCTGAAACTCTCCAGAGAGGACTCT 22252
Query 62363 CCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGC 62422
|| ||||| || || ||||| || | ||| | |||||||| || || | ||||| ||
Sbjct 22253 ACGTGTGTAGATGTTGCTGGTGTAGGCTTCGATGGACTCATTGTTGCCGAGTATTTGTGC 22312
Query 62423 AGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGAT 62482
|| || || || ||||| || |||| ||| | ||| ||||| | ||||| | | ||
Sbjct 22313 TGTGGAGGCTGTGGGCATGGGGGCCAACAACAGACTGTTTCTCACACCGTGTTTAGCAAT 22372
Query 62483 TTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNN 62542
|| || || || | | ||| | ||| || || | || ||
Sbjct 22373 CTTCTCCTTAAGCAGCTTCCAGTCCCAGAGCTCAGTGGGCACCTTTTCCCACATGTCATA 22432
Query 62543 TTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTC 62602
|| ||||| || |||| | || ||| ||||| || || || || || || ||
Sbjct 22433 CTGCAGAATGCCTCTACTCACTGGAGAGCCTGGGTATGTCTCATAAGGCCCATCTTTTTC 22492
Query 62603 AGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATT 62662
|| | || || || ||||| | ||| | || || ||||| || ||||||| ||||
Sbjct 22493 TGCCAACTCCCAGCTTGCCTCCAGGGCAGCATAGTAGATGGTCTCAAAGATCTGGATATT 22552
Query 62663 TAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAA 62722
|| || ||||| |||| |||||||||||| | ||| || || || || || |
Sbjct 22553 CAGCAGCTGGGCTTCAGGGCTTTCAAATGGATAACGCATGAGGATGAAGGCATCTGCAAG 22612
Query 62723 TCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAAT 62782
|| || |||||||| ||||| || || || | ||| || || | || ||||| ||||
Sbjct 22613 ACCCTGCACACCAATCCCGATTGGCCTGTGGCGCTTGTTTGAATTCTCTGCTTCAGGAAC 22672
Query 62783 AGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTT---GACCA- 62838
|| || || ||||| || || || || ||||| ||||| ||||||||||| ||||
Sbjct 22673 TGGGTAGTAGTTAATGTCAATGATCTTGTTGAGGTTTCTTACAATTACTTTAGTGACCGA 22732
Query 62839 --CATCCTTCAGTTTGAGAAAATCAAATCGCCCATCTA---TTACAAACATGTTCAAGGC 62893
|| ||| ||||| | ||||| | || | ||| ||||||| | ||
Sbjct 22733 GGCAAGCTT---TTTGA---AGTCAAAGGTGCGTTCCGGAGTAACATACATGTTGAGAGC 22786
Query 62894 AACAGATGCCAGATTACAAACGGCTACCTCAT--TAGCATCCGCATATTGTATTATCTCA 62951
|| || |||| ||||| ||||| || |||| | || | | ||| | | ||||||
Sbjct 22787 AATGGAGGCCAAGTTACAGACGGCCACTTCATCTTTGCTT--GTATACTCCACAATCTCA 22844
Query 62952 GTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 63011
||||| | ||||| || ||||| || || ||||| || || |||||||| |||||||
Sbjct 22845 GTGCACAAGTTACTGCATTTGATGGTGCCCAAATTCTGCTGGTTACTCTTCCTGTTACAG 22904
Query 63012 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63071
||||| || || | ||| | || || || ||||| ||||||| || || || || | |
Sbjct 22905 GCATCTTTGTACAACATGTAAGGTGTTCCTGTTTCTGTCTGAGACTCGATGATGGCATAC 22964
Query 63072 CAGA-CGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTAT--AGTGTA 63128
|| | | || ||||||| | | || ||| | || ||| ||| ||||||
Sbjct 22965 CACAACTGCT-GAGCCTTGACCACCCGCTTCACTCTACCCTCCTGTTCATATTGAGTGTA 23023
Query 63129 TACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACAC 63188
| || || ||||| || |||||| | ||||| ||||| || ||| || |||
Sbjct 23024 GAGCTTC--TCAAACTCCTCCCCCCAACACTCATCCAACCCAGGGCACTCACTGGGGCAC 23081
Query 63189 ATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGA 63248
|||| ||||| || || | | ||| | ||||| || |||||||| ||||| ||
Sbjct 23082 ATCAGAGACCAGTCCTGGTTGTTTTCCACCCTCTTCATGAACAGATCAGGGATCCATAGG 23141
Query 63249 GCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 63307
|| ||| || || |||| | || || ||||| || || || ||||| || || || ||
Sbjct 23142 GC-ATAGAAGAGGTCTCGTGCCCTCTGCTCCTCTTTACCAGTGTTCTTCTTCAGCTCAAG 23200
Query 63308 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTT 63367
||| | | | |||| | ||||| || |||| ||||||||| | | | || || |||||
Sbjct 23201 GAAGTCAAACACATCAAAGTGCCATGGCTCCAGGTATATGGCAAAAGCACCCGGTCGTTT 23260
Query 63368 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 63427
|| || || || || | ||| | |||||||| || || ||||||| ||| || | ||
Sbjct 23261 ATTGCCACCTTGGTCCACGTAGCGTGCGGTGTTGTTGTACACTCTCAGCATCGGCACAAG 23320
Query 63428 ACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAAT 63487
|| ||||| ||||||| || || | || || || || | | | |||| ||||
Sbjct 23321 GCCATTTGAGTTACCATTTGTTCCAGCAATGTAACTACCTGTTGATCTAATACAGCTAAC 23380
Query 63488 TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATA 63547
|| || ||| || || ||||| ||||||||| | || ||| |||| | || |||||
Sbjct 23381 TGCTACACCAATCCCTCCTGCAGATTTAGAGATGAGAGCACATTGTTTGAGTGTATCATA 23440
Query 63548 GATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACG 63607
|| || || ||||| ||||| ||||| || || || ||||| || | ||| | |
Sbjct 23441 AATGCCATCAATGCTGTCATCCTTCATGGCCAGCAGGAAGCAGCTGGAGAGCTGGGGTCT 23500
Query 63608 ACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAG 63667
| | || || || || || | || ||||| || || || ||||| || ||||| || ||
Sbjct 23501 ATTGGTGCCTGCGTTGAACAGAGTGGGAGAGGCATGAGTGAACCACTTCTCAGACAGCAG 23560
Query 63668 ATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCAT 63727
||||| |||||||| |||| |||||||| | || ||||| || || || | |||
Sbjct 23561 GTTGTAGGTCTCAATGGCTGCATCTATATCAGTGTTGTGGATTCCAACAGCTACTCTCAT 23620
Query 63728 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTC 63787
| ||||||||| || | ||| | | || || ||||||| || |||||| ||
Sbjct 23621 GAGCATGTGCTGTGGGCGCTCAGCCACTTTACCATTGATTTTCAGCAGGTAGGAGCGCTC 23680
Query 63788 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 63847
|| || ||||| ||||| | ||||| ||||| || | || ||||| ||| | |||||
Sbjct 23681 TAATGTCTTAAAGCCAAAGAAATTGTAAGAAAAATCCCTATCATAAATTATAGCAGAGTT 23740
Query 63848 GAGTTTATCCTTATATTTGTTA--ACTATATCCATGGTGATACTTG--AAATAATCGGAG 63903
||| || || | ||| | || ||||| | ||| |||| | || || || |
Sbjct 23741 GAGGCGGTCTTTGT--TTGCAAGGACAATATCTAGGGTCT--CTTGGGAGATCATGGGGG 23796
Query 63904 AATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATA 63963
| || | |||| |||||| ||||||| ||| | ||||||||| || ||||| || |
Sbjct 23797 AGTGGCGCTTATTTAAAGGATTGACATAGTGGAACAGATCCTCCATGACATCACTGAACA 23856
Query 63964 GtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAAT 64023
|| || || || || || || || || || || || | || || || ||||||||||
Sbjct 23857 CCTTCTTGGTCTCTTTATGGAGGTTGGACACAGCAATCCGTGCAGCCAGGATGGCATAAT 23916
Query 64024 CCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCG 64083
| || || | || || ||||| || || || || || || |||||||| || || |
Sbjct 23917 CTGGGTGCTTCGTGGTCAGTGTGGCAGCAATCTCTGCAGCAAGTGTGTCCAACTCCACAG 23976
Query 64084 TTGTTACTCCATTATATATTCCTTGAATAACCTTCATAGCTATTTTAATAGGATCTATAT 64143
| || ||||| | || | ||||| || |||||||| | |||| | || || | |
Sbjct 23977 TGGTCACTCCGCTGTACAGACCTTGGATCACCTTCATCGTGATTTGTGTGGGGTCCACAA 24036
Query 64144 GATCCGTGTTTAAGCCATAACATAATTTTCTAATACGAGACGTGATTTTATCAAACATGA 64203
|| | || | |||||||| | || || ||||| |||||||||||||||||||
Sbjct 24037 ACTCTGCATTGAGCCCATAACAGAGCTTCTGGATTCGAGAGGTGATTTTATCAAACATGA 24096
Query 64204 C 64204
|
Sbjct 24097 C 24097
>seq15624
Length=12484
Score = 120 bits (132), Expect = 4e-22
Identities = 143/192 (74%), Gaps = 4/192 (2%)
Strand=Plus/Plus
Query 62575 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 62634
||||||| || || ||||| || | ||||||||||||| || ||||| || ||| | |
Sbjct 11343 CATATGTTTCATAAGGTCCATCTTGGGCAGCTAGTTCACAGCTGGCCTCCAAAGCAGCAT 11402
Query 62635 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGC--TTCCAGGCTATCAAATGG 62692
|||||||||| || || |||| | || |||| || || || || || || |||||
Sbjct 11403 AATAAATGGTCTCAAAAATCTGGATGTTGAGATGCTGGGCCTTTTCA--CTTTCGAATGG 11460
Query 62693 ATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATG 62752
|||| | |||||| || |||||||| | || ||||||||||| || |||||||| ||
Sbjct 11461 ATAACGCATGAGAATGAAGGCGTCCGCAAGACCCTGAACACCAATCCCAATAGGTCTGTG 11520
Query 62753 TCTCTTATTAGA 62764
| | | |||||
Sbjct 11521 GCGCATGTTAGA 11532
>seq3431
Length=351
Score = 84.2 bits (92), Expect = 3e-11
Identities = 76/96 (79%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385
||||||| | ||||| ||||| ||||| || || ||||||||||| ||||| || || |
Sbjct 256 CCTCGTCGCGGCTAATAAGTTCATTGGAGAAAGTCAGTCCGGGCATCAGGCCTCGTTTCT 315
Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGA 33421
| ||||| || |||| || || |||||||| ||||
Sbjct 316 TCAGCCAGAAAATGGCGGCAAAGGATCCAGAGAAGA 351
>seq19576
Length=429644
Score = 82.4 bits (90), Expect = 1e-10
Identities = 75/95 (79%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 32998 GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCT 33057
|||||||| || | ||||| ||||| ||||||| ||||| || || || |||||||||
Sbjct 417714 GACATAACACCAAACTTTTGATATTCTGCCACACGCTTTTCAAAGAAGTTGGTTTTTCCT 417655
Query 33058 TCCAATGATATATTTTCCATGAAATCAAACGGATT 33092
|| | ||| || |||||||| |||||||||||
Sbjct 417654 TCTAGTGAGATCGACTCCATGAAGTCAAACGGATT 417620
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622583850471920
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