Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014- 12-02] 46,662 sequences; 679,761,122 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq27510 109 5e-19 >seq27510 Length=34911 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || | ||||| || | || || | ||||| || | | Sbjct 30134 ATGCAAATTTTTGTGAAGACCCTGACTGGGAAGACCATCACTTTGGAAGTGGAACCTAGT 30075 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | ||||| |||||| |||||||| || || ||||| || || Sbjct 30074 GACACCATTGAGAATGTCAAGGCAAAGATCCAGGACAAAGAGGGTATCCCTCCTGACCAG 30015 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| ||||||| || || ||||| || ||||||| | | | || || || ||| Sbjct 30014 CAGAGGCTGATTTTCGCTGGTAAGCAGCTTGAAGATGGTCGCACCCTCTCTGACTACAAC 29955 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 ||||| || ||||| || | || || ||| | | |||||||||||| Sbjct 29954 ATTCAGAAGGAATCCACCCTCCACTTGGTGCTGCGTTTGAGAGGAGGA 29907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429691498352610