Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014- 12-02] 46,662 sequences; 679,761,122 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq11038 122 8e-23 seq27510 98.7 9e-16 seq15624 95.1 1e-14 >seq11038 Length=78219 Score = 122 bits (134), Expect = 8e-23 Identities = 678/1072 (63%), Gaps = 40/1072 (4%) Strand=Plus/Plus Query 145109 GTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATG 145168 ||| ||| ||| | ||||| || ||||| || ||||| || || | || ||||||||| Sbjct 22272 GTGTAGGCTTCGATGGACTCATTGTTGCCGAGTATTTGTGCTGTGGAGGCTGTGGGCATG 22331 Query 145169 TACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCC 145228 |||| ||| | || | || ||||| || || | ||||| ||| | Sbjct 22332 GGGGCCAACAACAGACTGTTTCTCACACCGTGTTTAGCAATCTTCTCCTTAAGCAGCTTC 22391 Query 145229 CAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCC----CTC 145284 || ||||| ||| ||| ||| | ||||||||||| ||||||| |||||| ||| Sbjct 22392 CAGTCCCAGAGCTCAGTGGGCACCTTTTCCCACATGTCATACTGCAGAATGCCTCTACTC 22451 Query 145285 GCTGGCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTG--GCGAGCTCGCAA 145342 |||| | | ||| | | | ||| | |||| |||| || | ||| || Sbjct 22452 ACTGGAGAGCCTGGGT----ATGTCTCATAA--GGCCCATCTTTTTCTGCCAACTCCCAG 22505 Query 145343 CTCGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCT 145402 || |||||||| || | | || || ||||| || || | || |||||| ||| Sbjct 22506 CTTGCCTCCAGGGCAGCATAGTAGATGGTCTCAAAGATCTGGATATTCAGCAGCTGGGCT 22565 Query 145403 TCATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCC 145462 ||| ||| || | || |||| || | || ||||| || || ||||| | || Sbjct 22566 TCAGGGCTTTCAAATGGATAACGCATGAGGATGAAGGCATCTGCAAGACCCTGCACACCA 22625 Query 145463 ACGCCGATGGGCCGATGTTTCATGTTG-----CTCATCCTCGCCGACTCGATAGGATATC 145517 | ||||| |||| || | |||| ||| | || ||| | ||| | Sbjct 22626 ATCCCGATTGGCCTGTGGCGCTTGTTTGAATTCTCTGCTTCAGGAACTGGGTAGTAG--- 22682 Query 145518 GATTACGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAA-C 145576 ||| ||| || || || || | ||||| || | ||| || || | | |||| | Sbjct 22683 --TTAATGTCAATGATCTTGTTGAGGTTTCTTACAATTACTTTAGTGACC-GAGGCAAGC 22739 Query 145577 TTTTCAAAGTCAAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCC 145636 |||| |||||||| | || | | | || ||| | |||| || || || ||| Sbjct 22740 TTTTTGAAGTCAAAG-GTGCGTTCCGGAGTAACATACA--TGTTGAGAGCAATGGAGGCC 22796 Query 145637 AAATTACAAACTGCCGTCTCCTCGGCGTCGCT-GTATTGT--ACGATCTCGGCGCACAAA 145693 || ||||| || ||| || || | ||| |||| | || ||||| | |||||| Sbjct 22797 AAGTTACAGACGGCCACTTCATCT---TTGCTTGTATACTCCACAATCTCAGTGCACAAG 22853 Query 145694 TTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTG 145753 || || ||||||||||| |||| ||| ||||| ||||| |||||||| || || || ||| Sbjct 22854 TTACTGCATTTGATGGTGCCCAAATTCTGCTGGTTACTCTTCCTGTTACAGGCATCTTTG 22913 Query 145754 TAGAGCATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCC 145813 || | |||||| ||| || || || ||| | ||| | ||| | ||| | | Sbjct 22914 TACAACATGTAAGGTGTTCCTGTTTCTGTCTGAGACTCGATGATGGCATACCACAACTGC 22973 Query 145814 TGCGCACGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCA 145873 || || ||| | ||| | ||||| | ||| |||| ||||||||| |||| Sbjct 22974 TGAGCCTTGACCACCCGCTTCACTCTACCCTCCTGTTCATATTGAGTGTAGAGCTTCTCA 23033 Query 145874 AACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCAT 145933 ||| | || | || || || || || |||| |||| |||||||| ||||| Sbjct 23034 AACTCCTCCCCCCAACACTCATCCAACCCAGGGCACTCACTGGGGCACATCAGAGACCAG 23093 Query 145934 ACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAG 145993 | |||| | || | || ||| |||| ||| || | ||| || || || | | | Sbjct 23094 TCCTGGTTGTTTTCCACCCTCTTCATGAACAGATCAGGGATCCATAGGGCATAGAAGAGG 23153 Query 145994 --TCGCGCGCTTTGCAATCCTCAGCACCCATGTTTCGCTTCAAATTAAGCACACTATAGA 146051 ||| || || ||| ||||| ||| |||| ||||| | ||| | | | | Sbjct 23154 TCTCGTGCCCTCTGC--TCCTCTTTACCAGTGTTCTTCTTCAGCTCAAGGAAGTCAAACA 23211 Query 146052 TGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGT---TTGCCACCCT 146108 || |||||| || || | || | ||| | || || |||| |||||||| | Sbjct 23212 CATCAAAGTGCCATGGCTCCAGGTATATGGCAAAAGCACCCGGTCGTTTATTGCCACCTT 23271 Query 146109 GGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCC 146160 ||||||||| ||| | ||||||| | || | || ||| ||| | | ||| Sbjct 23272 GGTCCACGTAGCGTGCGGTGTTGTTGTACACTCTCAGCATCGGCACAAGGCC 23323 >seq27510 Length=34911 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || | |||||||||||| || || | ||| || ||||| ||||||||||| || Sbjct 29908 CCTCCTCTCAAACGCAGCACCAAGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCAGAG 29967 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || |||||||| || ||| | || | | ||||||||| |||||| Sbjct 29968 AGGGTGCGACCATCTTCAAGCTGCTTACCAGCGAAAATCAGCCTCTGCTGGTCAGGAGGG 30027 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || |||||||| ||| || ||||| | ||| | || || | | || | Sbjct 30028 ATACCCTCTTTGTCCTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTAGGTTCCACT 30087 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || || || || || ||||| ||||| Sbjct 30088 TCCAAAGTGATGGTCTTCCCAGTCAGGGTCTTCACAAAAATTTGCAT 30134 >seq15624 Length=12484 Score = 95.1 bits (104), Expect = 1e-14 Identities = 81/100 (81%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 145668 TGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGAT 145727 |||||| ||| ||||| | ||||| ||||| |||||||||| || ||||| ||||| | Sbjct 11853 TGTATTCTACAATCTCAGTGCACAGGTTGCTGGATTTGATGGTGCCTAGATTCTGCTGGT 11912 Query 145728 TACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGG 145767 | || ||||| ||||| || || |||||||||||||| || Sbjct 11913 TGCTCTTCCTATTGCATGCATCTTTGTAGAGCATGTATGG 11952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471737486734080