Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq11038 122 8e-23
seq27510 98.7 9e-16
seq15624 95.1 1e-14
>seq11038
Length=78219
Score = 122 bits (134), Expect = 8e-23
Identities = 678/1072 (63%), Gaps = 40/1072 (4%)
Strand=Plus/Plus
Query 145109 GTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATG 145168
||| ||| ||| | ||||| || ||||| || ||||| || || | || |||||||||
Sbjct 22272 GTGTAGGCTTCGATGGACTCATTGTTGCCGAGTATTTGTGCTGTGGAGGCTGTGGGCATG 22331
Query 145169 TACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCC 145228
|||| ||| | || | || ||||| || || | ||||| ||| |
Sbjct 22332 GGGGCCAACAACAGACTGTTTCTCACACCGTGTTTAGCAATCTTCTCCTTAAGCAGCTTC 22391
Query 145229 CAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCC----CTC 145284
|| ||||| ||| ||| ||| | ||||||||||| ||||||| |||||| |||
Sbjct 22392 CAGTCCCAGAGCTCAGTGGGCACCTTTTCCCACATGTCATACTGCAGAATGCCTCTACTC 22451
Query 145285 GCTGGCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTG--GCGAGCTCGCAA 145342
|||| | | ||| | | | ||| | |||| |||| || | ||| ||
Sbjct 22452 ACTGGAGAGCCTGGGT----ATGTCTCATAA--GGCCCATCTTTTTCTGCCAACTCCCAG 22505
Query 145343 CTCGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCT 145402
|| |||||||| || | | || || ||||| || || | || |||||| |||
Sbjct 22506 CTTGCCTCCAGGGCAGCATAGTAGATGGTCTCAAAGATCTGGATATTCAGCAGCTGGGCT 22565
Query 145403 TCATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCC 145462
||| ||| || | || |||| || | || ||||| || || ||||| | ||
Sbjct 22566 TCAGGGCTTTCAAATGGATAACGCATGAGGATGAAGGCATCTGCAAGACCCTGCACACCA 22625
Query 145463 ACGCCGATGGGCCGATGTTTCATGTTG-----CTCATCCTCGCCGACTCGATAGGATATC 145517
| ||||| |||| || | |||| ||| | || ||| | ||| |
Sbjct 22626 ATCCCGATTGGCCTGTGGCGCTTGTTTGAATTCTCTGCTTCAGGAACTGGGTAGTAG--- 22682
Query 145518 GATTACGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAA-C 145576
||| ||| || || || || | ||||| || | ||| || || | | |||| |
Sbjct 22683 --TTAATGTCAATGATCTTGTTGAGGTTTCTTACAATTACTTTAGTGACC-GAGGCAAGC 22739
Query 145577 TTTTCAAAGTCAAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCC 145636
|||| |||||||| | || | | | || ||| | |||| || || || |||
Sbjct 22740 TTTTTGAAGTCAAAG-GTGCGTTCCGGAGTAACATACA--TGTTGAGAGCAATGGAGGCC 22796
Query 145637 AAATTACAAACTGCCGTCTCCTCGGCGTCGCT-GTATTGT--ACGATCTCGGCGCACAAA 145693
|| ||||| || ||| || || | ||| |||| | || ||||| | ||||||
Sbjct 22797 AAGTTACAGACGGCCACTTCATCT---TTGCTTGTATACTCCACAATCTCAGTGCACAAG 22853
Query 145694 TTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTG 145753
|| || ||||||||||| |||| ||| ||||| ||||| |||||||| || || || |||
Sbjct 22854 TTACTGCATTTGATGGTGCCCAAATTCTGCTGGTTACTCTTCCTGTTACAGGCATCTTTG 22913
Query 145754 TAGAGCATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCC 145813
|| | |||||| ||| || || || ||| | ||| | ||| | ||| | |
Sbjct 22914 TACAACATGTAAGGTGTTCCTGTTTCTGTCTGAGACTCGATGATGGCATACCACAACTGC 22973
Query 145814 TGCGCACGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCA 145873
|| || ||| | ||| | ||||| | ||| |||| ||||||||| ||||
Sbjct 22974 TGAGCCTTGACCACCCGCTTCACTCTACCCTCCTGTTCATATTGAGTGTAGAGCTTCTCA 23033
Query 145874 AACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCAT 145933
||| | || | || || || || || |||| |||| |||||||| |||||
Sbjct 23034 AACTCCTCCCCCCAACACTCATCCAACCCAGGGCACTCACTGGGGCACATCAGAGACCAG 23093
Query 145934 ACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAG 145993
| |||| | || | || ||| |||| ||| || | ||| || || || | | |
Sbjct 23094 TCCTGGTTGTTTTCCACCCTCTTCATGAACAGATCAGGGATCCATAGGGCATAGAAGAGG 23153
Query 145994 --TCGCGCGCTTTGCAATCCTCAGCACCCATGTTTCGCTTCAAATTAAGCACACTATAGA 146051
||| || || ||| ||||| ||| |||| ||||| | ||| | | | |
Sbjct 23154 TCTCGTGCCCTCTGC--TCCTCTTTACCAGTGTTCTTCTTCAGCTCAAGGAAGTCAAACA 23211
Query 146052 TGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGT---TTGCCACCCT 146108
|| |||||| || || | || | ||| | || || |||| |||||||| |
Sbjct 23212 CATCAAAGTGCCATGGCTCCAGGTATATGGCAAAAGCACCCGGTCGTTTATTGCCACCTT 23271
Query 146109 GGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCC 146160
||||||||| ||| | ||||||| | || | || ||| ||| | | |||
Sbjct 23272 GGTCCACGTAGCGTGCGGTGTTGTTGTACACTCTCAGCATCGGCACAAGGCC 23323
>seq27510
Length=34911
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || | |||||||||||| || || | ||| || ||||| ||||||||||| ||
Sbjct 29908 CCTCCTCTCAAACGCAGCACCAAGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCAGAG 29967
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| || || |||||||| || ||| | || | | ||||||||| ||||||
Sbjct 29968 AGGGTGCGACCATCTTCAAGCTGCTTACCAGCGAAAATCAGCCTCTGCTGGTCAGGAGGG 30027
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || |||||||| ||| || ||||| | ||| | || || | | || |
Sbjct 30028 ATACCCTCTTTGTCCTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTAGGTTCCACT 30087
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| || || || || || || || ||||| |||||
Sbjct 30088 TCCAAAGTGATGGTCTTCCCAGTCAGGGTCTTCACAAAAATTTGCAT 30134
>seq15624
Length=12484
Score = 95.1 bits (104), Expect = 1e-14
Identities = 81/100 (81%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 145668 TGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGAT 145727
|||||| ||| ||||| | ||||| ||||| |||||||||| || ||||| ||||| |
Sbjct 11853 TGTATTCTACAATCTCAGTGCACAGGTTGCTGGATTTGATGGTGCCTAGATTCTGCTGGT 11912
Query 145728 TACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGG 145767
| || ||||| ||||| || || |||||||||||||| ||
Sbjct 11913 TGCTCTTCCTATTGCATGCATCTTTGTAGAGCATGTATGG 11952
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471737486734080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |