Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq27510 127 2e-24
seq11038 120 3e-22
>seq27510
Length=34911
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
||||||||||||||| || || | || || || || ||||| | ||||||||| | |
Sbjct 30135 GATGCAAATTTTTGTGAAGACCCTGACTGGGAAGACCATCACTTTGGAAGTGGAACCTAG 30076
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
|| ||| | || || |||| ||| || || ||||| |||||||| || || || ||
Sbjct 30075 TGACACCATTGAGAATGTCAAGGCAAAGATCCAGGACAAAGAGGGTATCCCTCCTGACCA 30016
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|| | || || || || || || ||| | || ||| |||||| |||| || |||||
Sbjct 30015 GCAGAGGCTGATTTTCGCTGGTAAGCAGCTTGAAGATGGTCGCACCCTCTCTGACTACAA 29956
Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|||||| || ||||||||| | || || || |||| ||| | |||||
Sbjct 29955 CATTCAGAAGGAATCCACCCTCCACTTGGTGCTGCGTTTGAGAGGAGG 29908
>seq11038
Length=78219
Score = 120 bits (132), Expect = 3e-22
Identities = 123/161 (76%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 129688 TTGACACAAATCGAGGCCAAATTGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACA 129747
|||| | ||| |||||||| || |||||||| ||| | |||| | ||||| |||
Sbjct 22779 TTGAGAGCAATGGAGGCCAAGTTACAGACGGCCACTTCATCTTTGCTTGTATACTCCACA 22838
Query 129748 ATTTCGGCGCACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGATTACTTTTCATG 129807
|| || | |||||| ||||| ||| ||||||||||||| || || ||||| ||| ||
Sbjct 22839 ATCTCAGTGCACAAGTTACTGCATTTGATGGTGCCCAAATTCTGCTGGTTACTCTTCCTG 22898
Query 129808 TTGCAAGCATCTTTGTACATCATGTACGGCGTGCCCGTTTC 129848
|| || ||||||||||||| |||||| || || || |||||
Sbjct 22899 TTACAGGCATCTTTGTACAACATGTAAGGTGTTCCTGTTTC 22939
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419489303572030
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |