Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq21350 93.3 9e-14
seq11041 91.5 3e-13
seq44444 89.7 1e-12
seq42560 89.7 1e-12
seq29256 89.7 1e-12
seq23661 89.7 1e-12
seq9690 89.7 1e-12
seq45035 87.8 4e-12
>seq21350
Length=14758
Score = 93.3 bits (102), Expect = 9e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561
|||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct 7305 TAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 7246
Query 142562 GCCCCACATCGGGC 142575
||||||| | ||||
Sbjct 7245 GCCCCACGTTGGGC 7232
Score = 93.3 bits (102), Expect = 9e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561
|||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct 8369 TAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 8310
Query 142562 GCCCCACATCGGGC 142575
||||||| | ||||
Sbjct 8309 GCCCCACGTTGGGC 8296
>seq11041
Length=26801
Score = 91.5 bits (100), Expect = 3e-13
Identities = 77/92 (84%), Gaps = 6/92 (7%)
Strand=Plus/Plus
Query 142052 TGTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGA 142110
|||||||||||||||||||| |||||| ||||||||||||||| ||| | |||||||||
Sbjct 550 TGTCTCTGTGGCGCAATGGAATAGCGCGCTGGACTTCTAATCCAGAGGCTCCGGGTTCGA 609
Query 142111 CCCCCGCCAGA---GACGCCAGGATGTGTGAT 142139
|||| |||| ||||||| ||||| |||
Sbjct 610 GTCCCGGCAGAGATGACGCCA--ATGTGGGAT 639
>seq44444
Length=117570
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 87592 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 87533
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 87532 CCCACGTTGGGC 87521
>seq42560
Length=46544
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 40062 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 40121
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 40122 CCCACGTTGGGC 40133
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 41804 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 41863
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 41864 CCCACGTTGGGC 41875
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 43286 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 43345
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 43346 CCCACGTTGGGC 43357
>seq29256
Length=33740
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 30621 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 30680
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 30681 CCCACGTTGGGC 30692
>seq23661
Length=4458
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 2408 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 2349
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 2348 CCCACGTTGGGC 2337
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 3360 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 3301
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 3300 CCCACGTTGGGC 3289
>seq9690
Length=142009
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 3891 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 3950
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 3951 CCCACGTTGGGC 3962
>seq45035
Length=27598
Score = 87.8 bits (96), Expect = 4e-12
Identities = 67/77 (87%), Gaps = 2/77 (3%)
Strand=Plus/Minus
Query 142048 CGCATGTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGT 142106
|||| ||||||||||||||||||| |||||| ||||||||||||||| ||| | |||||
Sbjct 15296 CGCA-GTCTCTGTGGCGCAATGGAATAGCGCGCTGGACTTCTAATCCAGAGGCTCCGGGT 15238
Query 142107 TCGACCCCCGCCAGAGA 142123
|||| |||| ||||||
Sbjct 15237 TCGAGTCCCGGCAGAGA 15221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027222300702742
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |