Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq27510 168 1e-36
seq44130 122 2e-22
seq9418 84.2 4e-11
>seq27510
Length=34911
Score = 168 bits (186), Expect = 1e-36
Identities = 177/233 (76%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||| | || || | |||||||| || |||||||| || |||||||| || || |||
Sbjct 30136 CCTCCTCTCAGACGTAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 30195
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||||| ||||| || || || || || || || ||||| || ||
Sbjct 30196 AGAGTGCGGCCATCTTCTAGTTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCAGGAGGG 30255
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| |||||||| ||||| ||||| ||||| ||| || || ||||| | || |||
Sbjct 30256 ATACCTTCCTTATCTTGGATCTTGGCCTTCACGTTTTCAATTGTGTCACTCGGCTCAACT 30315
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATGCT 68467
||||| ||||||||||| || || |||||||| || || ||||||||| ||||
Sbjct 30316 TCCAAAGTGATGGTTTTACCAGTCAGGGTCTTAACAAAGATCTGCATTTTGCT 30368
Score = 163 bits (180), Expect = 5e-35
Identities = 176/233 (76%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 68229 TAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAA 68288
|| |||||||| | | |||| |||||||| || ||||| || || || ||||| ||
Sbjct 29902 TAGTTTCCTCCTCTCAAACGCAGCACCAAGTGGAGGGTGGATTCCTTCTGAATGTTGTAG 29961
Query 68289 TCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCG 68348
|| ||||| || | |||||||| | |||||| || ||||| || || || || |||||
Sbjct 29962 TCAGAGAGGGTGCGACCATCTTCAAGCTGCTTACCAGCGAAAATCAGCCTCTGCTGGTCA 30021
Query 68349 GGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT 68408
|| || || || || ||||| || |||||||||||||| ||| |||||||| | |
Sbjct 30022 GGAGGGATACCCTCTTTGTCCTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTAGGT 30081
Query 68409 TCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| |||||||| |||||||| || || || |||||||| || || || |||||
Sbjct 30082 TCCACTTCCAAAGTGATGGTCTTCCCAGTCAGGGTCTTCACAAAAATTTGCAT 30134
>seq44130
Length=14217
Score = 122 bits (134), Expect = 2e-22
Identities = 160/219 (73%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
|| |||| || | ||| || ||| | ||||| |||||||| || |||||||| || |
Sbjct 11842 AGACGCAGGACAAGGTGAAGGGTGAATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGG 11901
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | |||||| || | || || || || || || || || ||||||||||||
Sbjct 11902 CCATCTTCAAGCTGCTTGCCAACAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCC 11961
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGT 68422
||||| |||||||| || | || || || |||| ||| | || || | || ||
Sbjct 11962 TTGTCCTGAATCTTGGCTATAACATTTTCAGTGATGTC-GCTGGGTTTGACCTGCAGAGT 12020
Query 68423 GATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||||| || || |||||||| || || || ||||| ||
Sbjct 12021 GATGGTCTTCCCAGTGAGGGTTTTCACAAAAATCTGTAT 12059
>seq9418
Length=8239
Score = 84.2 bits (92), Expect = 4e-11
Identities = 83/105 (79%), Gaps = 2/105 (2%)
Strand=Plus/Plus
Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTC 68416
|| ||||| || || ||||| ||||| || |||||||||||| ||| | || || ||
Sbjct 3531 CCCTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTGTC-GCTGGGCTCGACCTC 3589
Query 68417 CAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
| ||||||||| || |||||||| ||||| ||||| ||||||||
Sbjct 3590 GAGGGTGATGGTCTTCCCCGTGAGAGTCTTCACGAAGATCTGCAT 3634
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921084840694640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |