Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014- 12-02] 46,662 sequences; 679,761,122 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq27510 104 2e-17 seq44130 93.3 4e-14 >seq27510 Length=34911 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||| || ||||||||||| || | || ||| ||||||||| || |||||| Sbjct 29938 GTGGATTCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGACCATCTTCAAGCTGCTTACCA 29997 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| | || || | ||| ||||| ||||| || || |||||||| |||||| || Sbjct 29998 GCGAAAATCAGCCTCTGCTGGTCAGGAGGGATACCCTCTTTGTCCTGGATCTTTGCCTTG 30057 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| | | ||| || |||| || | || || || ||||| || Sbjct 30058 ACATTCTCAATGGTGTCACTAGGTTCCACTTCCAAAGTGATGGTCTTCCCAGTCAGGGTC 30117 Query 114366 TTTACAAAAATCTGCAT 114382 || |||||||| ||||| Sbjct 30118 TTCACAAAAATTTGCAT 30134 >seq44130 Length=14217 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 114190 ATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGT 114249 ||||||| || |||||||| ||| | || || ||||||||| || || ||| | Sbjct 11867 ATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCAAGCTGCTTGCCAACAA 11926 Query 114250 AGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCT 114309 |||| || | ||| || || || ||||||||||| ||||| |||||| | | | | Sbjct 11927 AGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGAATCTTGGCTATAACAT 11986 Query 114310 GTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTA 114369 |||| | ||||| ||| || ||| | || || | || || || || || ||||| | Sbjct 11987 TTTCAGTGATGTCGCTGGGTTTGACCTGCAGAGTGATGGTCTTCCCAGTGAGGGTTTTCA 12046 Query 114370 CAAAAATCTGCATG 114383 |||||||||| ||| Sbjct 12047 CAAAAATCTGTATG 12060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419895472455144