Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq11038 269 5e-67
seq5499 84.2 4e-11
>seq11038
Length=78219
Score = 269 bits (298), Expect = 5e-67
Identities = 870/1342 (65%), Gaps = 44/1342 (3%)
Strand=Plus/Plus
Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149
||| || | |||||||||||| || || || | || ||||| ||||||| || |
Sbjct 22220 GTTTACAATCTGAAACTCTCCAGAGAGGACTCTACGTGTGTAGATGTTGCTGGTGTAGGC 22279
Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209
|||||| ||| ||||||| ||||| || || ||| || || |||||||| | ||
Sbjct 22280 TTCGATGGACTCATTGTTGCCGAGTATTTGTGCTGTGGAGGCTGTGGGCATGGGGGCCAA 22339
Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCA 244269
|| ||||||||| ||||| ||||| | || | ||| |||||||||||
Sbjct 22340 CAACAGACTGTTTCTCACACCGTGTTTAGCAATCTTCTCCTTAAGCAGCTTCCAGTCCCA 22399
Query 244270 CATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCT 244329
| | | | | ||| ||| ||||||||||| ||||||| | || | ||
Sbjct 22400 GAGCTCAGTGGGCACCT----TTT-----CCCACATGTCATACTGCAGAATGCCTCTACT 22450
Query 244330 GACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTC 244389
|| || ||| ||| ||| || || || || | |||| || ||||| |
Sbjct 22451 CACTGGAGAGCCTGGGTATGTCTCATAAGGCCCATCTTTTTCTGCCAACTCCCAGCTTGC 22510
Query 244390 GTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCC 244449
|| ||||| || |||||||||||||| |||||| | |||| | || || |||
Sbjct 22511 CTCCAGGGCAGCATAGTAGATGGTCTCAAAGATCTGGATATTCA-GCAGCTGGGCTT--- 22566
Query 244450 GCAGG----TGAAGGGGATGCC-CATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCG 244504
|||| | || |||| | ||| | |||||| | || || || |||||||| ||
Sbjct 22567 -CAGGGCTTTCAAATGGATAACGCATGAGGATGAAGGCATCTGCAAGACCCTGCACACCA 22625
Query 244505 ATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTG 244564
|| ||||| || ||||| |||||||| || | ||||| || || ||||| ||||
Sbjct 22626 ATCCCGATTGGCCTGTGGCGCTTGTTTGAATTCTCTGCTTCAGGAACTGGGTAGTAGTTA 22685
Query 244565 CCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGA 244624
||| || | |||||||||||| | || | ||| ||| ||| |
Sbjct 22686 ATGTCAATGATCTTGTTGAGGTTTCTTACAATTACTTTAGTGACCGAGGCAAGCTTTTTG 22745
Query 244625 AAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACG 244684
||||| | || | | ||| || | | ||| || |||||| || | |
Sbjct 22746 AAGTCAAAG--GT-GCGTTCC--------GGAG----TAACATACATGTTGAGAGCAATG 22790
Query 244685 CTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAG 244744
||||| ||| ||||||||||| || || | | || |||| |||||||| |||||
Sbjct 22791 GAGGCCAAGTTACAGACGGCCACTTCATCTTTGCTTGTATACTCCACAATCTCAGTGCAC 22850
Query 244745 AGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCC 244804
| ||||||||| ||||||||||||| | ||| || || ||| ||| ||||| ||
Sbjct 22851 AAGTTACTGCATTTGATGGTGCCCAAATTCTGCTGGTTACTCTTCCTGTTACAGGCATCT 22910
Query 244805 TTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGG 244864
||||| | |||| | || || || || ||| | ||| || | | ||| |
Sbjct 22911 TTGTACAACATGTAAGGTGTTCCTGTTTCTGTCTGAGACTCGATGATGGCATACCACAAC 22970
Query 244865 TCCCTAGCCTTGACCGTCCTGCGAGCCT-TGCCCTCTGCCTCGTAGCGGGTGTACAGGGC 244923
| | |||||||||| || || || | ||||| || || | ||||| ||
Sbjct 22971 TGCTGAGCCTTGACCACCC-GCTTCACTCTACCCTCCTGTTCATATTGAGTGTAGAGCTT 23029
Query 244924 CTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACT 244983
||| ||||| ||||| ||| || | || |||||| |||||||| |||
Sbjct 23030 CTCAAACTCCTCCCCCCAACACTCATCCAACCCAGGGCACTCACTGGGGCACATCAGAGA 23089
Query 244984 CCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAA 245043
||| || | || | ||||||| |||||| || || |||||||| ||||| | |||
Sbjct 23090 CCAGTCCTGGTTGTTTTCCACCCTCTTCATGAACAGATCAGGGATCCATAGGGCATAGAA 23149
Query 245044 GAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAA 245103
|||||| | | ||||||||| || |||||||||||| ||||||| | ||||||||
Sbjct 23150 GAGGTCTCGTGCCCTCTGCTCCTCTTTACCAGTGTTCTTCTTCAGCTCAAGGAAGTCAAA 23209
Query 245104 GACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCC 245163
|| || | |||||| ||||||| ||| | || | || || || || || ||||| ||
Sbjct 23210 CACATCAAAGTGCCATGGCTCCAGGTATATGGCAAAAGCACCCGGTCGTTTATTGCCACC 23269
Query 245164 CTGGTCCACCATCCTCTCGAGCG----CGTTGAAGATGCGCAGGGTAGGCACTATGCCGT 245219
||||||| | | || ||| |||| | | | ||| | ||||| | ||| |
Sbjct 23270 TTGGTCCA----CGTAGCGTGCGGTGTTGTTGTACACTCTCAGCATCGGCACAAGGCCAT 23325
Query 245220 TAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACA 245279
| |||| || || || || ||||| || | || | ||| | | |
Sbjct 23326 TTGAGTTACCATTTGTTCCAGCAATGTAACTACCTGTTGATCTAATACAGCTAACTGCTA 23385
Query 245280 TGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGC 245339
|| | || || || || |||||||| || || |||| || || ||||
Sbjct 23386 CACCAATCCCTCCTGCAGATTTAGAGATGAGAGCACATTGTTTGAGTGTATCATAAATGC 23445
Query 245340 CCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGC 245399
| || |||||||| ||||||| ||||| |||||| ||| |||||||| | |
Sbjct 23446 CATCAATGCTGTCATCCTTCATGGCCAGCAGGAAGCAGCTGGAGAGCTGGGGTCTATTGG 23505
Query 245400 TGCACGAGTTGAACAGAGTGGG 245421
||| | |||||||||||||||
Sbjct 23506 TGCCTGCGTTGAACAGAGTGGG 23527
>seq5499
Length=1901
Score = 84.2 bits (92), Expect = 4e-11
Identities = 69/84 (82%), Gaps = 0/84 (0%)
Strand=Plus/Plus
Query 42477 TTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATA 42536
|||||| ||||||||||| |||||||||||||||||||| |||||||| || ||
Sbjct 1535 TTCATGCAAGAGGTGCAGGTAACGGAGGCGCGCTGCTTCTACGGGTTCCAGATCGCGATG 1594
Query 42537 GAGAACGTGCACTCTGAGGTGTAC 42560
|||||| | ||||| ||| |||||
Sbjct 1595 GAGAACATCCACTCGGAGATGTAC 1618
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 943788390553120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |