Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq27510 140 4e-28
seq33802 95.1 1e-14
seq16345 93.3 5e-14
seq40586 89.7 6e-13
seq37664 89.7 6e-13
seq29256 89.7 6e-13
seq22143 89.7 6e-13
seq14977 89.7 6e-13
seq10936 89.7 6e-13
>seq27510
Length=34911
Score = 140 bits (154), Expect = 4e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
|||||||| ||||||| |||||| || | ||| ||||| ||||| ||||| ||||
Sbjct 29908 CCTCCTCTCAAACGCAGCACCAAGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCAGAG 29967
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
|| || || | || || ||||||||||||||||| || || | ||||||||| | ||
Sbjct 29968 AGGGTGCGACCATCTTCAAGCTGCTTACCAGCGAAAATCAGCCTCTGCTGGTCAGGAGGG 30027
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161
| | ||| |||||| ||| ||| |||| || | | ||||| || | ||||||
Sbjct 30028 ATACCCTCTTTGTCCTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTAGGTTCCACT 30087
Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| | |||||||| || || || || ||||| ||||| ||||||||
Sbjct 30088 TCCAAAGTGATGGTCTTCCCAGTCAGGGTCTTCACAAAAATTTGCAT 30134
Score = 113 bits (124), Expect = 5e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
|||||||| | ||| | |||||| || | ||| |||||| || || ||||| ||||
Sbjct 30136 CCTCCTCTCAGACGTAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 30195
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
||||| || | || ||||| ||||||||||| || || || | ||||||||| | ||
Sbjct 30196 AGAGTGCGGCCATCTTCTAGTTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCAGGAGGG 30255
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161
| | ||||| || ||| || || | | | | ||||| |||| || ||
Sbjct 30256 ATACCTTCCTTATCTTGGATCTTGGCCTTCACGTTTTCAATTGTGTCACTCGGCTCAACT 30315
Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211
|| | ||||||||||| || || || ||||| |||||||| ||||||||
Sbjct 30316 TCCAAAGTGATGGTTTTACCAGTCAGGGTCTTAACAAAGATCTGCATTTT 30365
>seq33802
Length=59224
Score = 95.1 bits (104), Expect = 1e-14
Identities = 67/77 (87%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 57002 ATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCAC 57061
|||| |||| || || | ||| |||||| ||||||||||||||||||||| ||||||||
Sbjct 5048 ATTTCCTCCCCGTCAGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCAC 4989
Query 57062 CACTATACTACCGAGGA 57078
|||||||||| ||||||
Sbjct 4988 CACTATACTAACGAGGA 4972
Score = 93.3 bits (102), Expect = 5e-14
Identities = 69/81 (85%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||| |||| |||| || | | ||| |||||| ||||||||||||||||||||| ||||
Sbjct 2174 AAAGATTTCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 2115
Query 57058 TCACCACTATACTACCGAGGA 57078
|||||||||||||| ||||||
Sbjct 2114 TCACCACTATACTAACGAGGA 2094
Score = 93.3 bits (102), Expect = 5e-14
Identities = 69/81 (85%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||| |||| |||| || | | ||| |||||| ||||||||||||||||||||| ||||
Sbjct 2489 AAATATTTCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 2430
Query 57058 TCACCACTATACTACCGAGGA 57078
|||||||||||||| ||||||
Sbjct 2429 TCACCACTATACTAACGAGGA 2409
Score = 93.3 bits (102), Expect = 5e-14
Identities = 69/81 (85%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||| |||| |||| || | | ||| |||||| ||||||||||||||||||||| ||||
Sbjct 2831 AAATATTTCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 2772
Query 57058 TCACCACTATACTACCGAGGA 57078
|||||||||||||| ||||||
Sbjct 2771 TCACCACTATACTAACGAGGA 2751
Score = 89.7 bits (98), Expect = 6e-13
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 57002 ATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCAC 57061
|||| |||| || | | ||| |||||| ||||||||||||||||||||| ||||||||
Sbjct 6433 ATTTCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCAC 6374
Query 57062 CACTATACTACCGAGGA 57078
|||||||||| ||||||
Sbjct 6373 CACTATACTAACGAGGA 6357
>seq16345
Length=60839
Score = 93.3 bits (102), Expect = 5e-14
Identities = 69/81 (85%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||||| | |||| || | | |||||||||| ||||||||||||||||||||| ||||
Sbjct 33848 AAAAAGTACCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 33789
Query 57058 TCACCACTATACTACCGAGGA 57078
|||||||||||||| ||||||
Sbjct 33788 TCACCACTATACTAACGAGGA 33768
Score = 89.7 bits (98), Expect = 6e-13
Identities = 70/83 (84%), Gaps = 2/83 (2%)
Strand=Plus/Minus
Query 56998 AAAAATTTT--CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 57055
|||||| || |||| || | | ||| |||||| ||||||||||||||||||||| ||
Sbjct 36061 AAAAATATTGACTCCACGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 36002
Query 57056 ACTCACCACTATACTACCGAGGA 57078
|||||||||||||||| ||||||
Sbjct 36001 ACTCACCACTATACTAACGAGGA 35979
Score = 84.2 bits (92), Expect = 2e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 57004 TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 57063
|| |||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||||
Sbjct 35529 TTCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCA 35470
Query 57064 CTATACTACCGAGGAT 57079
|||||||| |||||||
Sbjct 35469 CTATACTAACGAGGAT 35454
>seq40586
Length=28695
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 1850 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1909
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 1910 TACTAACGAGGA 1921
>seq37664
Length=211294
Score = 89.7 bits (98), Expect = 6e-13
Identities = 70/83 (84%), Gaps = 2/83 (2%)
Strand=Plus/Minus
Query 56998 AAAAATTTT--CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 57055
||||| ||| |||| || | | |||||||||| ||||||||||||||||||||| ||
Sbjct 102234 AAAAACTTTGCCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 102175
Query 57056 ACTCACCACTATACTACCGAGGA 57078
||| |||||||||||| ||||||
Sbjct 102174 ACTTACCACTATACTAACGAGGA 102152
>seq29256
Length=33740
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 31622 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 31681
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 31682 TACTAACGAGGA 31693
>seq22143
Length=78845
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 18696 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 18755
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 18756 TACTAACGAGGA 18767
>seq14977
Length=4178
Score = 89.7 bits (98), Expect = 6e-13
Identities = 70/83 (84%), Gaps = 2/83 (2%)
Strand=Plus/Minus
Query 56998 AAAAATTTT--CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 57055
||| ||||| |||| || | | ||| |||||| ||||||||||||||||||||| ||
Sbjct 804 AAACATTTTTCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 745
Query 57056 ACTCACCACTATACTACCGAGGA 57078
|||||||||||||||| ||||||
Sbjct 744 ACTCACCACTATACTAACGAGGA 722
Score = 89.7 bits (98), Expect = 6e-13
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 57002 ATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCAC 57061
|||| |||| || | | ||| |||||| ||||||||||||||||||||| ||||||||
Sbjct 2236 ATTTCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCAC 2177
Query 57062 CACTATACTACCGAGGA 57078
|||||||||| ||||||
Sbjct 2176 CACTATACTAACGAGGA 2160
Score = 86.0 bits (94), Expect = 7e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 57004 TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 57063
|| |||| || | | ||| |||||| ||||||||||||||||||||| ||||||||||
Sbjct 116 TTCCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCA 57
Query 57064 CTATACTACCGAGGA 57078
|||||||| ||||||
Sbjct 56 CTATACTAACGAGGA 42
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | ||| |||||| ||||||||||||||||||||| |||||||||||||
Sbjct 3728 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 3669
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 3668 TACTAACGAGGA 3657
>seq10936
Length=53695
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 29306 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 29247
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 29246 TACTAACGAGGA 29235
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 542895957554080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |