Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq27510 140 3e-28
seq44130 95.1 1e-14
seq11038 84.2 2e-11
>seq27510
Length=34911
Score = 140 bits (154), Expect = 3e-28
Identities = 149/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| ||||| || ||||||||||| || | || |||||| | |||||||||||||| ||
Sbjct 29938 GTGGATTCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGACCATCTTCAAGCTGCTTACCA 29997
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| |||| |||| ||||||||| ||||| || || ||||| || || || ||| |||
Sbjct 29998 GCGAAAATCAGCCTCTGCTGGTCAGGAGGGATACCCTCTTTGTCCTGGATCTTTGCCTTG 30057
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| ||| | || |||| | |||||||| | ||| | |||||| || |||| ||
Sbjct 30058 ACATTCTCAATGGTGTCACTAGGTTCCACTTCCAAAGTGATGGTCTTCCCAGTCAGGGTC 30117
Query 64427 TTTACGAAAATTTGCAT 64443
|| || |||||||||||
Sbjct 30118 TTCACAAAAATTTGCAT 30134
>seq44130
Length=14217
Score = 95.1 bits (104), Expect = 1e-14
Identities = 152/216 (70%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || || |||| || ||||||| || |||||||| || | || |||||| | |||
Sbjct 11848 AGGACAAGGTGAAGGGTGAATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 11907
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|||||||||||||| || | || |||| |||||| || || ||||| ||||| || ||
Sbjct 11908 TCAAGCTGCTTGCCAACAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCC 11967
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTG-TATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| | | || ||| || | | || || | || | || | || | | ||| | |||
Sbjct 11968 TG-AATCTTGGCTATAACATTTTCAGTGATGTCGCTGGGTTTGACCTGCAGAGTGATGGT 12026
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
||| || || | ||||| || ||||| || || ||
Sbjct 12027 CTTCCCAGTGAGGGTTTTCACAAAAATCTGTATGTT 12062
>seq11038
Length=78219
Score = 84.2 bits (92), Expect = 2e-11
Identities = 108/149 (72%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 154587 GACGCCAAGTTGCAAACGGCAATTTCTTCAGAACTACTGTATTGCACAATTTCTGCGCAC 154646
|| |||||||| || ||||| | ||| || || | || | |||||| || | ||||
Sbjct 22791 GAGGCCAAGTTACAGACGGCCACTTCATCTTTGCTTGTATACTCCACAATCTCAGTGCAC 22850
Query 154647 AAATTACTGCATCGAATGGTGCCCAGGTTTTTCTGATTCGATTTGATGTTGCATGCGTCT 154706
|| ||||||||| |||||||||| || | ||| || || |||| || || |||
Sbjct 22851 AAGTTACTGCATTTGATGGTGCCCAAATTCTGCTGGTTACTCTTCCTGTTACAGGCATCT 22910
Query 154707 TTGTACAAAATGTACGGGGTGCCCGTTTC 154735
|||||||| ||||| || || || |||||
Sbjct 22911 TTGTACAACATGTAAGGTGTTCCTGTTTC 22939
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499353369679280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |