Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq11038 105 7e-18
seq15624 95.1 1e-14
>seq11038
Length=78219
Score = 105 bits (116), Expect = 7e-18
Identities = 708/1115 (63%), Gaps = 41/1115 (4%)
Strand=Plus/Minus
Query 94081 GGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCG 94140
|| || ||||| | ||| || ||||| || || ||||| | || | ||||||| | ||
Sbjct 23344 GGAACAAATGGTAACTCAAATGGCCTTGTGCCGATGCTGAGAGTGTACAACAACACCGCA 23285
Query 94141 CGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCC 94200
|||||||||||||| ||||| | | |||| |||| || | || || |||||
Sbjct 23284 CGCTACGTGGACCAAGGTGGCAATAAACGACCGGGTGCTTTTGCCATATACCTGGAGCCA 23225
Query 94201 TGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAG 94260
|||||| || ||| | ||| | || ||| |||||| || || || | ||
Sbjct 23224 TGGCACTTTGATGTGTTTGACTTCCTTGAGCTGAAGAAGAACACTGGTAAAGAGGAGCAG 23165
Query 94261 AGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAG 94320
||||| ||||||||||||| || || ||| | || || || || ||||| | || ||
Sbjct 23164 AGGGCACGAGACCTCTTCTATGCCCTATGGATCCCTGATCTGTTCATGAAGAGGGTGGAA 23105
Query 94321 AAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGT 94380
|| ||| | |||| ||| | || |||| ||| || || || || || |||
Sbjct 23104 AACAACCAGGACTGGTCTCTGATGTGCCCCAGTGAGTGCCCTGGGTTGGATGAGTGTTGG 23045
Query 94381 GGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGAAGGTT 94440
|| | ||||| | | || ||| || ||| | |||| | | | | |||
Sbjct 23044 GGGGAGGAGTTTGAGAAGCTCTACACTCAATATGAACAGGAGGGTAGAGTGAAGCGGGTG 22985
Query 94441 ATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCC 94500
| | ||| | || ||||| || ||| | || ||| || || || || ||
Sbjct 22984 GTCAAGGCTCAGCAGTTGTGGTATGCCATCATCGAGTCTCAGACAGAAACAGGAACACCT 22925
Query 94501 TACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGAT 94559
||||| |||| ||| || |||| ||| ||| ||||||||| | | || ||
Sbjct 22924 TACATGTTGTACAAAGATGCCTGT-AACAGGAAGAGTAACCAGCAGAATTTGGGCACCAT 22866
Query 94560 CAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGT 94619
||| || || ||||||| |||||||| |||||||| || || | || ||
Sbjct 22865 CAAATGCAGTAACTTGTGCACTGAGATTGTGGAGTATACAAGCAAAGATGAAGTGGCCGT 22806
Query 94620 GTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTCTACTGC 94679
|||||| ||| |||||| || || || | || ||| ||| | || ||
Sbjct 22805 CTGTAACTTGGCCTCCAT--TGCTCTCAACAT--GT-----ATG-TTACTCCGGAAC-GC 22757
Query 94680 TTCGTTCGATCTGGAGGAGCTTGTGAACTTCG--CGGGAAGG--ATGGTCTTGAACCTGA 94735
| || || | | |||||| | ||| | || | || || ||||| |
Sbjct 22756 -ACCTTTGACTTCAAAAAGCTTG----CCTCGGTCACTAAAGTAATTGTAAGAAACCTCA 22702
Query 94736 ACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGAAGC 94795
||| | | || |||| |||| |||||| || || || || ||||| |||||| | |
Sbjct 22701 ACAAGATCATTGACATTAACTACTACCCAGTTCCTGAAGCAGAGAATTCAAACAAGCGCC 22642
Query 94796 ATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGTCTGC 94855
| |||| ||||| || || || |||||| | || || || | | | |||||| |
Sbjct 22641 ACAGGCCAATCGGGATTGGTGTGCAGGGTCTTGCAGATGCCTTCATCCTCATGCGTTATC 22582
Query 94856 CCTACGA---CTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTATT 94912
| | || | ||| | | | || | ||||| | | || || || | ||| || |
Sbjct 22581 CATTTGAAAGCCCTGAAG-CCCAGCTG--CTGAATATCCAGATCTTTGAGACCATCTACT 22525
Query 94913 ACGGGGCCAT-GAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAATCG 94971
| | ||| | || ||| | | | |||| |||| | | ||||| | || |
Sbjct 22524 ATGCTGCCCTGGAGGCAAGCTG-GGAGTTGG-CAGA--AAAAGATGGGCCTTATGAGACA 22469
Query 94972 TTCCGCGGATCGCCCTTG-GAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCC 95030
| || || || || || | | | |||||| | |||| ||| | |||| | |||
Sbjct 22468 TACCCAGGCTCTCCAGTGAGTAGA-GGCATTCTGCAGTATGACATGTGGGAAAAGGTGCC 22410
Query 95031 CTCGGGTCTGTACGACTGGGAAGCT-CT--ACGCGCTGATGTTATCAAACACGGTGTGAA 95087
| | | || | |||| ||||||| || | | | || || |||||||||||||
Sbjct 22409 CACTGAGCTCTGGGACT-GGAAGCTGCTTAAGGAGAAGA--TTGCTAAACACGGTGTGAG 22353
Query 95088 AAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAA 95147
|||| ||| | |||||||||||||||| |||||||| || || || || ||||||||
Sbjct 22352 AAACAGTCTGTTGTTGGCCCCCATGCCCACAGCCTCCACAGCACAAATACTCGGCAACAA 22293
Query 95148 CGAGTCGTTCGAACCCTTCACCTCCAACGTGTACA 95182
||||| ||||| ||| |||| |||| | ||||
Sbjct 22292 TGAGTCCATCGAAGCCTACACCAGCAACATCTACA 22258
>seq15624
Length=12484
Score = 95.1 bits (104), Expect = 1e-14
Identities = 106/142 (75%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 95077 CACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATC 95136
|| ||||||| ||| ||||| ||||||| |||||||| |||||||| || ||||||
Sbjct 10908 CATGGTGTGAGGAACAGCCTGCTCCTGGCCCCAATGCCCACAGCCTCCACTGCCCAGATC 10849
Query 95137 CTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTC 95196
|| |||||||||||||| | || | | |||| |||| | |||| | |||||||
Sbjct 10848 CTCGGCAACAACGAGTCCATTGAGGCTTACACCAGCAACATTTACACTCGTAGGGTGCTT 10789
Query 95197 GCCGGGGAATTCCCCGTCATCA 95218
| ||||| |||| |||| ||
Sbjct 10788 TCAGGGGAGTTCCAGGTCAGCA 10767
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494434640325520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |