Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq11038 109 5e-19
seq27510 98.7 1e-15
>seq11038
Length=78219
Score = 109 bits (120), Expect = 5e-19
Identities = 433/675 (64%), Gaps = 21/675 (3%)
Strand=Plus/Plus
Query 153075 TTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTC 153134
||||| ||| | | ||| | ||| || || ||||| |||||||| || |||| || ||
Sbjct 22266 TTGCTGGTGTAGGCTTCGATGGACTCATTGTTGCCGAGTATTTGTGCTGTGGAGGCTGTG 22325
Query 153135 GGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAAC 153194
|||||| |||| ||||| | || | || ||||| ||| | ||||| | |
Sbjct 22326 GGCATGGGGGCCAACAACAGACTGTTTCTCACACCGTGTTTAGCAATCTTCTCCTTAAGC 22385
Query 153195 GCCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCT 153254
|| ||| ||||| ||| | | || | | ||||||||| ||||| | | |||
Sbjct 22386 AGCTTCCAGTCCCAGAGCTCAGTGGGCACCTTTTCCCACATGTCATACTGCAGAATGCCT 22445
Query 153255 CGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAG 153314
| ||| | ||| ||| | | || || || || || |||| || |||
Sbjct 22446 CTACTCACTGGAGAGCCTGGGTATGTCTCATAAGGCCCATCTTTTTCTGCCAACTCCCAG 22505
Query 153315 CTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCT 153374
|| ||||| || || ||||||| ||||| || ||| || |||| || | |||
Sbjct 22506 CTTGCCTCCAGGGCAGCATAGTAGATGGTCTCAAAGATCTGGATATTCAGCAGCTGGGCT 22565
Query 153375 TCTTCGCTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCG 153434
|| ||| || | || |||| || | ||||| || || |||||||| | |||
Sbjct 22566 TCAGGGCTTTCAAATGGATAACGCATGAGGATGAAGGCATCTGCAAGACCCTGCACACCA 22625
Query 153435 ACGCCGATGGGTCGATGCTTCTCGTTG-----CTGCGCCTCGCGCTCGCTATGGGATAGT 153489
| ||||| || | || || ||| || || || | | |||| ||||
Sbjct 22626 ATCCCGATTGGCCTGTGGCGCTTGTTTGAATTCTCTGCTTCAGGAAC----TGGG-TAGT 22680
Query 153490 GATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTT 153549
|| || || || ||||||||||| | || | |||||||| | || ||| |
Sbjct 22681 AGTTAATGTCAATGATCTTGTTGAGGTTTCTTACAATTACTTTAGTGACCGAGGCAAGCT 22740
Query 153550 TCTCGAAATCATAGGT-CATTTCGTCGACGCGTACGCATCGATTCACGGCAATAGACGCC 153608
| | ||| ||| |||| | || || | | || ||| || | ||||| || |||
Sbjct 22741 TTTTGAAGTCAAAGGTGCGTTCCGGAGTAACATA--CAT--GTTGAGAGCAATGGAGGCC 22796
Query 153609 AGATTACAGACGGCCGTCTCTTCGGCGTCGC---TGTACTGCACGATCTCGGCGCAGAGG 153665
| ||||||||||| | |||| | | || | |||| ||| ||||| | ||| | |
Sbjct 22797 AAGTTACAGACGGC---CACTTCATCTTTGCTTGTATACTCCACAATCTCAGTGCACAAG 22853
Query 153666 TTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTG 153725
|| |||||||| ||| ||||||||| ||||| || || || | || || || ||||||
Sbjct 22854 TTACTGCATTTGATGGTGCCCAAATTCTGCTGGTTACTCTTCCTGTTACAGGCATCTTTG 22913
Query 153726 AAGAGCATGTACGGT 153740
| | |||||| |||
Sbjct 22914 TACAACATGTAAGGT 22928
>seq27510
Length=34911
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| || ||| | || || || | | | |||||||| || |||||||||||
Sbjct 30136 CCTCCTCTCAGACGTAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 30195
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| || || || ||||| ||||| | | | || || | ||| ||||| |||||
Sbjct 30196 AGAGTGCGGCCATCTTCTAGTTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCAGGAGGG 30255
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|||||||| || || ||| || || | | ||| | ||||| ||| ||| ||
Sbjct 30256 ATACCTTCCTTATCTTGGATCTTGGCCTTCACGTTTTCAATTGTGTCACTCGGCTCAACT 30315
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | |||||||||||||| || || ||||| ||||||||
Sbjct 30316 TCCAAAGTGATGGTTTTACCAGTCAGGGTCTTAACAAAGATCTGCAT 30362
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| |||||||| || || || | | | || ||||| ||||||||||||||
Sbjct 29908 CCTCCTCTCAAACGCAGCACCAAGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCAGAG 29967
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || || || || || ||||| | | || || | ||| ||||| |||||
Sbjct 29968 AGGGTGCGACCATCTTCAAGCTGCTTACCAGCGAAAATCAGCCTCTGCTGGTCAGGAGGG 30027
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
||||| |||||||| ||| ||| || | | || | |||||| | | |||||
Sbjct 30028 ATACCCTCTTTGTCCTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTAGGTTCCACT 30087
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | || || |||||||| || || |||||||| |||||
Sbjct 30088 TCCAAAGTGATGGTCTTCCCAGTCAGGGTCTTCACAAAAATTTGCAT 30134
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 495972942548640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |