Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq11038 136 4e-27
>seq11038
Length=78219
Score = 136 bits (150), Expect = 4e-27
Identities = 492/757 (65%), Gaps = 26/757 (3%)
Strand=Plus/Plus
Query 146043 GAGGGCCTTGATGAGATACTGGTTGACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAG 146102
|||| |||| | |||| |||| || | ||||||||| || | ||| || | |
Sbjct 22199 GAGGTCCTTCAGCAGATGTGGGTTTACAATCTGAAACTCTCCAGAGAGGACTCTACGTGT 22258
Query 146103 ATACACGTTGCTGGTGAACGGCTCGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGT 146162
|| | |||||||||| | | |||| ||||| ||||| |||||||| || || || |
Sbjct 22259 GTAGATGTTGCTGGTGTAGGCTTCGATGGACTCATTGTTGCCGAGTATTTGTGCTGTGGA 22318
Query 146163 AGCGGTAGGCATGTACGCCACCAGCAAAGAGTTTCTCACGCCGTGTCTTTGAATCTTTTC 146222
|| || |||||| |||| || || | ||||||||| |||||| | |||||| ||
Sbjct 22319 GGCTGTGGGCATGGGGGCCAACAACAGACTGTTTCTCACACCGTGTTTAGCAATCTTCTC 22378
Query 146223 CC---GTAGTTTGGACCAATTCCACAAATGATCCGTGGGATAGATATTGTAGTTGTCGTA 146279
| | || || ||| | ||| | | || ||||| | | | |||| ||
Sbjct 22379 CTTAAGCAGCTT---CCAGTCCCAGA---GCTCAGTGGGCACCTTTTCCCACATGTCATA 22432
Query 146280 ATGCATAGTGCCGCGGAACAGGGGGCTATTCTCG-TACGATTCATAAGGACCGTCGATCT 146338
|||| | |||| | || || | || | || | |||||||| || || | |
Sbjct 22433 CTGCAGAATGCCTCTACTCACTGGAG-AGCCTGGGTATGTCTCATAAGGCCCATCTTTTT 22491
Query 146339 TGGCCAGTTCGCAGCTAGCTTCCAGAGCCGAAAAGTATATGGTCTCCGCGATCATGTAGT 146398
|||| || ||||| || ||||| || | | |||| |||||||| |||| | |
Sbjct 22492 CTGCCAACTCCCAGCTTGCCTCCAGGGCAGCATAGTAGATGGTCTCAAAGATCTGGATAT 22551
Query 146399 TGACGCTCCTGGCCTCCTCG-CTGTCGTAGGGGATATCG-AGAAGCACAAAGGCGTCGGC 146456
| | || |||| || | | || || | || ||| || | || | ||||| || ||
Sbjct 22552 TCA-GCAGCTGGGCTTCAGGGCTTTCAAATGG-ATAACGCATGAGGATGAAGGCATCTGC 22609
Query 146457 GAGACCCTGTATCCCGACACCAACGGGGCGGTGTTTCTTGTTACTGTTCGCAGCGCCCGC 146516
|||||||| | || | || | || | ||| |||||| ||| | || | |
Sbjct 22610 AAGACCCTGCACACCAATCCCGATTGGCCTGTGGCGCTTGTTTGAATTCTCTGCTTCAGG 22669
Query 146517 AGTGGGATAGTGGTTGCTGTCGATGATCTTGTTGAGATTACGCACGACAATTTTCGTCAA 146576
| || |||| ||| |||| |||||||||||||| || | || | | ||| || |
Sbjct 22670 AACTGGGTAGTAGTTAATGTCAATGATCTTGTTGAGGTTTCTTACAATTACTTTAGTGAC 22729
Query 146577 ACGATTCA-GCAGGACATAGTCAAATGT---TTTAGTTTTAACGTTGACGCACTTGTTGA 146632
||| || || ||||||| || || | |||| | || ||||||
Sbjct 22730 -CGAGGCAAGCTTTTTGAAGTCAAAGGTGCGTTCCGGAGTAACAT------ACATGTTGA 22782
Query 146633 CGGCGATAGAGGCCAAGTTACATACGGCAGTCTCGTCCTTGTCGCAATACTGCACAATCT 146692
|| || |||||||||||||| ||||| || || ||| ||||| ||||||||
Sbjct 22783 GAGCAATGGAGGCCAAGTTACAGACGGCCACTTCATCTTTGCTTGTATACTCCACAATCT 22842
Query 146693 CGGCGCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTTACTAAACTTGTTGC 146752
| | ||| | ||| ||||| |||||| |||||||||| | |||||||| | |||| |
Sbjct 22843 CAGTGCACAAGTTACTGCATTTGATGGTGCCCAAATTCTGCTGGTTACTCTTCCTGTTAC 22902
Query 146753 AGGGGTCCTTGTAGAGCATGTACGGTCCCCCGGTTTC 146789
||| || ||||| | |||||| ||| || |||||
Sbjct 22903 AGGCATCTTTGTACAACATGTAAGGTGTTCCTGTTTC 22939
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475223452270880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |