Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_012783.2
Length=226205
Score E
Sequences producing significant alignments: (Bits) Value
seq14925 113 7e-20
seq38854 111 2e-19
seq7084 87.8 3e-12
>seq14925
Length=171059
Score = 113 bits (124), Expect = 7e-20
Identities = 148/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 8933 GTTGCGGTTTTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTAC 8992
||||| | ||||| ||||| || || || | || || || ||||| ||||||||||||
Sbjct 58518 GTTGCAGAATTCACTATGTCAAATCCAACTTTGCCTCCAAATGTGCTTGGTTTCCAGTAC 58577
Query 8993 GCCGGGGAGCAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCG 9052
|| || || ||| |||| ||| || ||||||| |||||| |||||||||| |||
Sbjct 58578 ATGGGAGAACATATGGGGTTCCCCAATAGTCCTTTCAGGGAAAAGGGAGCCCCCATCTCC 58637
Query 9053 ATGATGCTCTCACCGAAGATGGCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAG 9112
| |||||||| || || || || || ||||||| ||| || | | || |||| ||
Sbjct 58638 ACCATGCTCTCTCCAAATATTGCTCCTGGACGCGTTTTCTCCAACAAGAGACCAGGATAA 58697
Query 9113 AGTTCGACAGCCTCGACGTCGCCAT 9137
| ||| | ||| | | ||| ||||
Sbjct 58698 AATTCAAGAGCATTTATGTCACCAT 58722
>seq38854
Length=59830
Score = 111 bits (122), Expect = 2e-19
Identities = 171/244 (70%), Gaps = 0/244 (0%)
Strand=Plus/Minus
Query 8936 GCGGTTTTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGCC 8995
|| || || | |||||| || || || | || ||||| ||||| || ||||| || |
Sbjct 59614 GCCGTGTTGATGATGTCGAAGCCCACCTGGCCTCCGAAAGTGCTTGGCTTCCAATATTCA 59555
Query 8996 GGGGAGCAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGATG 9055
|||||||||||| |||| ||||||| ||||| | ||| || || || |||| || |
Sbjct 59554 GGGGAGCAGATGGCGTTTCCCATGAGGCCTTTGAGGGAGAAGGGGGCGCCCATTTCAACC 59495
Query 9056 ATGCTCTCACCGAAGATGGCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAGAGT 9115
||| |||| ||||| |||||| | | | || || ||||| | | || | ||| ||
Sbjct 59494 ATGGTCTCCCCGAAAATGGCATCCTGTCTGGGCTTCTCGACCAGCAGACCCGGGTACAGC 59435
Query 9116 TCGACAGCCTCGACGTCGCCATAGAGGGCTTCCAACTCGGCAGCTATCTCCTTCTCACCT 9175
|| || || || |||| ||||| | | ||||| ||| || || || || || |||
Sbjct 59434 TCCACGGCGTCCACGTGTCCATACATCTCCTCCAAAATGGCCGCCATTTCTTTATCTCCT 59375
Query 9176 ACAA 9179
||||
Sbjct 59374 ACAA 59371
>seq7084
Length=102118
Score = 87.8 bits (96), Expect = 3e-12
Identities = 116/161 (72%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 8933 GTTGCGGTTTTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTAC 8992
||||| |||| |||| | || ||| || || || || || ||||| |||||||||
Sbjct 52325 GTTGCACTTTTGACGACCTGAAAGCCTGTCTCTCCTCCAAATGTACTGGGCTTCCAGTAC 52384
Query 8993 GCCGGGGAGCAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCG 9052
|||||||||||| | || ||| | ||||| | ||||| ||||| |||| |||
Sbjct 52385 TCCGGGGAGCAGAGGGGATTTCCCAGCAAACCTTTTAGAGAAAAAGGAGCGCCCATCTCC 52444
Query 9053 ATGATGCTCTCACCGAAGATGGCACCGGGACGCGGTTTTTC 9093
| || ||||| || |||||||| || || |||| ||| ||
Sbjct 52445 ACCATACTCTCCCCAAAGATGGCTCCTGGCCGCGTTTTCTC 52485
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 723305867550800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |