Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014- 12-02] 46,662 sequences; 679,761,122 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq11038 131 3e-25 seq15624 93.3 7e-14 >seq11038 Length=78219 Score = 131 bits (144), Expect = 3e-25 Identities = 237/347 (68%), Gaps = 0/347 (0%) Strand=Plus/Plus Query 204167 AGCTCCCGCACCAGGTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTG 204226 || ||| || ||| || ||||| | |||||||| ||||| || || || | || ||| Sbjct 22200 AGGTCCTTCAGCAGATGTGGGTTTACAATCTGAAACTCTCCAGAGAGGACTCTACGTGTG 22259 Query 204227 AACAGGTTGTTGGTGAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTG 204286 | | |||| ||||| | | ||||| | ||| |||||||||| || || || ||| | Sbjct 22260 TAGATGTTGCTGGTGTAGGCTTCGATGGACTCATTGTTGCCGAGTATTTGTGCTGTGGAG 22319 Query 204287 GCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGC 204346 || ||||||||||| |||| | ||| ||| | |||||||| ||| | | | | Sbjct 22320 GCTGTGGGCATGGGGGCCAACAACAGACTGTTTCTCACACCGTGTTTAGCAATCTTCTCC 22379 Query 204347 TTCAGAGAGGTCCAGTCGTGCATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAG 204406 || || ||||||| | | || |||| | |||||||||| |||| | Sbjct 22380 TTAAGCAGCTTCCAGTCCCAGAGCTCAGTGGGCACCTTTTCCCACATGTCATACTGCAGA 22439 Query 204407 ATGCCTTGACTGACTGGGCTGCCCTTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGC 204466 |||||| ||| ||||| ||| ||| ||| ||||||| ||| | |||||||| | Sbjct 22440 ATGCCTCTACTCACTGGAGAGCCTGGGTATGTCTCATAAGGCCCATCTTTTTCTGCCAAC 22499 Query 204467 TTGCACGAGGCGGCCATGGCGTGATAGTACATGGTCTCAAAGATCTG 204513 | || || ||| ||| |||||| ||||||||||||||||| Sbjct 22500 TCCCAGCTTGCCTCCAGGGCAGCATAGTAGATGGTCTCAAAGATCTG 22546 >seq15624 Length=12484 Score = 93.3 bits (102), Expect = 7e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 204189 TGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTT 204248 || ||| ||| || || || || ||||||| || ||| | | |||| ||||| | | | Sbjct 10767 TGCTGACCTGGAACTCCCCTGAAAGCACCCTACGAGTGTAAATGTTGCTGGTGTAAGCCT 10826 Query 204249 CGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGA 204308 | | | |||||||||||||| ||||| || ||| ||| |||||||| || ||||||| Sbjct 10827 CAATGGACTCGTTGTTGCCGAGGATCTGGGCAGTGGAGGCTGTGGGCATTGGGGCCAGGA 10886 Query 204309 GCAGGGAGTTGCGCACACC 204327 ||||| ||| | |||||| Sbjct 10887 GCAGGCTGTTCCTCACACC 10905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794691405850720