Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq27510 131 4e-25
seq44130 104 6e-17
>seq27510
Length=34911
Score = 131 bits (144), Expect = 4e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||| || | |||||| || || ||||| || | ||||||||||| | || | |||||
Sbjct 29922 CAGCACCAAGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGACCATC 29981
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
||| |||||||| || ||||| || || | ||||||||| ||| || || ||| ||
Sbjct 29982 TTCAAGCTGCTTACCAGCGAAAATCAGCCTCTGCTGGTCAGGAGGGATACCCTCTTTGTC 30041
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| |||||| ||| || || | |||||| | | ||| || ||||| ||||| ||
Sbjct 30042 CTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTAGGTTCCACTTCCAAAGTGATGGT 30101
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || || || || ||||||||||||||
Sbjct 30102 CTTCCCAGTCAGGGTCTTCACAAAAATTTG 30131
Score = 116 bits (128), Expect = 9e-21
Identities = 157/218 (72%), Gaps = 3/218 (1%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || | |||||| || |||||||| |||| ||||||||||| | ||| | ||||||
Sbjct 30151 AGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCT 30210
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| || ||||| || || || || || | ||||||||| ||| || ||||| ||
Sbjct 30211 TCTAGTTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCAGGAGGGATACCTTCCTTATCT 30270
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||||||| ||| | ||||| | | || || ||||| ||||| ||
Sbjct 30271 TGGATCTTGGCCTTCACGTTTTCAATTGTGTCACTCGGCTCAACTTCCAAAGTGATGGTT 30330
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635
||||| || || || || ||||| || || ||||||
Sbjct 30331 TTACCAGTCAGGGTCTTAACAAAGATCTG---CATTTT 30365
>seq44130
Length=14217
Score = 104 bits (114), Expect = 6e-17
Identities = 151/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
|||||||||||| || || | || || |||| ||||||||| | | || | |||||
Sbjct 11847 CAGGACAAGGTGAAGGGTGAATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATC 11906
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
||| |||||||| || | ||||| || | |||||| || || ||| ||||| ||
Sbjct 11907 TTCAAGCTGCTTGCCAACAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTC 11966
Query 199537 CTGAATCTTTTGCT-TCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCG 199595
||||||| || ||| | || ||| | |||| | | || || | || ||||| |
Sbjct 11967 CTGAATC-TTGGCTATAACATTTTCAGTGATGTCGCTGGGTTTGACCTGCAGAGTGATGG 12025
Query 199596 TCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||| || ||||| |||||||||||||| ||
Sbjct 12026 TCTTCCCAGTGAGGGTTTTCACAAAAATCTG 12056
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178216773616354
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |