Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq27510 134 1e-26
seq44130 98.7 1e-15
seq5499 91.5 1e-13
>seq27510
Length=34911
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || || || || || || || || |||||||| | || || || | |
Sbjct 30134 ATGCAAATTTTTGTGAAGACCCTGACTGGGAAGACCATCACTTTGGAAGTGGAACCTAGT 30075
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || | ||| |||| ||||||||||| || || | |||||
Sbjct 30074 GACACCATTGAGAATGTCAAGGCAAAGATCCAGGACAAAGAGGGTATCCCTCCTGACCAG 30015
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| |||| |||| ||| || || ||||| || || | ||||||||| |||||||||
Sbjct 30014 CAGAGGCTGATTTTCGCTGGTAAGCAGCTTGAAGATGGTCGCACCCTCTCTGACTACAAC 29955
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|| || |||||| | || || || |||||||||||||||||||| ||
Sbjct 29954 ATTCAGAAGGAATCCACCCTCCACTTGGTGCTGCGTTTGAGAGGAGG 29908
Score = 107 bits (118), Expect = 2e-18
Identities = 164/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|||||||| || || || || || || || || ||||||||||| | || || ||| |
Sbjct 30365 AAAATGCAGATCTTTGTTAAGACCCTGACTGGTAAAACCATCACTTTGGAAGTTGAGCCG 30306
Query 38301 ACCGACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
| |||| | | ||||| | || | || |||| || || || || || || | ||
Sbjct 30305 AGTGACACAATTGAAAACG-TGAAGGCCAAGATCCAAGATAAGGAAGGTATCCCTCCTGA 30247
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
||| ||| |||| |||| || || || || || || || | ||||| ||| |||||
Sbjct 30246 CCAGCAGAGGCTGATTTTTGCTGGTAAGCAACTAGAAGATGGCCGCACTCTCTCTGACTA 30187
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||||| ||||| | || || || |||||||| ||| ||||||| ||
Sbjct 30186 CAACATCCAGAAGGAGTCCACCCTCCACTTGGTGCTACGTCTGAGAGGAGG 30136
>seq44130
Length=14217
Score = 98.7 bits (108), Expect = 1e-15
Identities = 163/233 (70%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| || || || || || ||||| ||||| || || |||||||| | | ||| | ||
Sbjct 12062 AACATACAGATTTTTGTGAAAACCCTCACTGGGAAGACCATCACTCTGCAGGTCAAACCC 12003
Query 38301 ACCGACAGCG-TGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
| ||||| | || ||| | ||| || || || | ||||| || || |||||| | ||
Sbjct 12002 AGCGACATCACTGAAAATG-TTATAGCCAAGATTCAGGACAAGGAAGGCATTCCCCCAGA 11944
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
|| ||| |||| || | | ||||| ||||| || || | ||||||||| ||||||
Sbjct 11943 TCAGCAGAGGCTGATCTTTGTTGGCAAGCAGCTTGAAGATGGCCGCACCCTCTCCGACTA 11884
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472
||||||||| || ||| || || || | || |||||| | | || ||||
Sbjct 11883 CAACATCCAGAAAGAATTCACCCTTCACCTTGTCCTGCGTCTCTGGGGTGGCC 11831
>seq5499
Length=1901
Score = 91.5 bits (100), Expect = 1e-13
Identities = 91/116 (78%), Gaps = 4/116 (3%)
Strand=Plus/Minus
Query 133168 TAGGTGTCGATGAG--GGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAA 133225
|||||||||||||| || | ||||| |||||||| | ||||||||| ||||| || |
Sbjct 1638 TAGGTGTCGATGAGCAGGCTG--TACATCTCCGAGTGGATGTTCTCCATCGCGATCTGGA 1581
Query 133226 AGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACC 133281
| ||||| ||||| |||||||| |||||||| ||||| ||| ||||| |||
Sbjct 1580 ACCCGTAGAAGCAGCGCGCCTCCGTTACCTGCACCTCTTGCATGAAGCGCTCCACC 1525
Score = 89.7 bits (98), Expect = 5e-13
Identities = 93/122 (76%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 133278 GACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGAT 133337
|||||| || |||||||| |||||||| ||||||||||||||||||| ||||| ||
Sbjct 1434 GACCAGGTTCTCGTTGACAATGCCGTCACTGGCGGCGAAAAAGGCCAAAACGTGAGAAAT 1375
Query 133338 GAAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCAC 133397
||| | ||| | ||| |||| |||||||| || ||| ||||||||||| ||
Sbjct 1374 GAAGAACCTCTCATCGTCCTTCAGAGACTCCCAGTGCTGCAGGTCTTTGGACAGGTCGAC 1315
Query 133398 CT 133399
||
Sbjct 1314 CT 1313
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499881061710080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |