Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq43552 163 1e-34
seq27510 102 3e-16
seq44075 96.9 1e-14
seq18256 84.2 9e-11
>seq43552
Length=261649
Score = 163 bits (180), Expect = 1e-34
Identities = 285/414 (69%), Gaps = 3/414 (1%)
Strand=Plus/Minus
Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252
|| |||||| | | |||| | || |||||||||| || | ||| ||| ||||||
Sbjct 30990 GGCAAGCCCAAAGTAGAAGTGGAGTACAAAGGTGAAATAAAGGCGTTTTATCCAGAAGAA 30931
Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312
|| || || |||||| | ||| ||||| |||| ||||| ||| | || |
Sbjct 30930 ATCTCGTCAATGGTTTTGGTTAAGATGAAGGAAATTGCAGAGGCGTATTTGGGGAAGAGA 30871
Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372
|| | ||||||| || || || || ||||||||||| || | ||||| ||||| ||
Sbjct 30870 GTGTCCAATGCAGTCATCACAGTCCCTGCTTATTTCAACGACTCCCAACGCCAAGCCACA 30811
Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432
|||||||| ||| |||| |||| | ||||| || |||| || |||||||| || |||
Sbjct 30810 AAAGATGCCGGAGTTATTTCTGGCCTGAATGTACTGAGAATCATCAATGAACCAACCGCA 30751
Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492
|||||| | |||||||| |||| || || ||| || || |||| || | |
Sbjct 30750 GCTGCTATTGCATATGGTCTAGACAAGGGAA---AAAGAGGGGAGCGAAATGTTCTCATT 30694
Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTT 451552
|||||| | ||||| || ||| ||| || | || ||||||||||||| | |||
Sbjct 30693 TTTGATCTGGGTGGTGGCACTTTTGACGTATCCATCCTGACAATTGAAGATGGTATTTTT 30634
Query 451553 GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAAT 451606
||||| || || || || || || || | || || ||||| |||| |||
Sbjct 30633 GAAGTGAAAGCCACAGCCGGCGACACACACTTGGGCGGAGAAGACTTTGACAAT 30580
>seq27510
Length=34911
Score = 102 bits (112), Expect = 3e-16
Identities = 158/226 (70%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | || || ||||| || |||||||||||||| || ||| | || ||||| |
Sbjct 30363 AATGCAGATCTTTGTTAAGACCCTGACTGGTAAAACCATCACTTTGGAAGTTGAGCCGAG 30304
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
||| | |||||| | || || || |||||||||||||| || |||||||| ||
Sbjct 30303 TGACACAATTGAAAACGTGAAGGCCAAGATCCAAGATAAGGAAGGTATCCCTCCTGACCA 30244
Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228
|| | | ||||| | || || ||||| |||||||| | ||| | | || || ||
Sbjct 30243 GCAGAGGCTGATTTTTGCTGGTAAGCAACTAGAAGATGGCCGCACTCTCTCTGACTACAA 30184
Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274
|| | ||||| | || || ||||| || || | |||||||||
Sbjct 30183 CATCCAGAAGGAGTCCACCCTCCACTTGGTGCTACGTCTGAGAGGA 30138
>seq44075
Length=47006
Score = 96.9 bits (106), Expect = 1e-14
Identities = 104/138 (75%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 451312 AGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAAC 451371
||| | | |||| || | ||||| || || || ||||||||| | || || || || ||
Sbjct 4602 AGTAAATAATGCTGTTGTGACTGTGCCAGCCTACTTCAATGATTCTCAGCGTCAGGCTAC 4661
Query 451372 TAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGC 451431
|||||||||||| ||| |||| | ||||||||||| ||||| ||||| || |||||
Sbjct 4662 AAAAGATGCAGGAGTCATTTGTGGTCTTAATGTTCTTCGCATTATCAATGAGCCAACAGC 4721
Query 451432 AGCTGCTCTAGCATATGG 451449
|||||| | || || ||
Sbjct 4722 TGCTGCTATTGCTTACGG 4739
>seq18256
Length=57157
Score = 84.2 bits (92), Expect = 9e-11
Identities = 96/129 (74%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 451475 GaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCA 451534
|| || |||||| | || |||||||| ||||| || || ||| ||| | || |
Sbjct 31517 GAGAAGAATATTCTTGTGTTTGATTTGGGTGGTGGCACATTTGACGTCTCTCTTCTGACC 31458
Query 451535 ATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAA 451594
||||| | || ||||||||||| ||||||||||| || || |||||||||||||||
Sbjct 31457 ATTGACAACGGTGTATTTGAAGTGGTCGCAACCAATGGGGACACCCATCTAGGAGGTGAA 31398
Query 451595 GATATTGAT 451603
||| | |||
Sbjct 31397 GATTTCGAT 31389
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1974537203171496
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |