Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq43552 327 9e-84
seq44075 114 1e-19
seq43642 95.1 9e-14
>seq43552
Length=261649
Score = 327 bits (362), Expect = 9e-84
Identities = 922/1408 (65%), Gaps = 12/1408 (1%)
Strand=Plus/Plus
Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318
|||| ||||| || || ||||| ||||| | || ||||| || ||||| || |||||
Sbjct 29816 GCAGAGACATTGAGGATGCCATTAGCATCGATGTCGAATGTTACCTCAATCTGTGGGACT 29875
Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 517378
||||| | || ||||||||||| || | ||| | || || || || ||||||
Sbjct 29876 CCTCTTGGGGCTGGTGGGATCCCCGTCAGGTCAAACTTGCCAAGGAGGTTGTTGTCTTTA 29935
Query 517379 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 517438
|| | | |||||| || || | ||||| || | | || ||||| || ||
Sbjct 29936 GTCATGGCCCTTTCACCTTCAAACACCTGGATGAGCACACCTGGCTGGTTATCGGAGTAG 29995
Query 517439 GTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTC 517498
|| | || | | || || ||| || || || ||||| | | || | ||||
Sbjct 29996 GTGGAGAAGATTTGGGTTTGTTTGGTGGGGATGGTGGTGTTACGCTTGATCAACGCGGTC 30055
Query 517499 ATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATA 517558
|| | || ||||||||||| | || | ||| || |||| ||||| | | | |
Sbjct 30056 ATTACTCCTCCTGCTGTTTCAATGCCCAAAGACAGTGGAGCAACATCTAGCAAAAGGAGG 30115
Query 517559 TTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATAT 517618
| || | || || || | || | || ||||| || || | ||||| |||||
Sbjct 30116 TCCTGGACATTCTCTGAGGTGTCCCCCATCAGGATAGCAGCCTGTACCGCAGCTCCATAG 30175
Query 517619 GCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAA 517678
|| || |||||||| || || | ||| || | | | ||||| || || |
Sbjct 30176 GCCACCGCTTCATCTGGGTTGATGCTTTTGTTCAACTCCCTTCCATTAAAGAAGTCCTGC 30235
Query 517679 AGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACC 517738
|| |||| | | || ||||| | | ||||| ||||| | || || || | | |
Sbjct 30236 AGTAGTTTTTGGATTTTGGGAATTCTCGTGGATCCACCAACCAGGACTATGTCGTTGATC 30295
Query 517739 TGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTA 517798
| || || |||| || | || |||| |||| || || || || || | ||
Sbjct 30296 TTGGACTTGTCCATCTTGGCGTCTTGTAAAGCTTTCTCTACAGGGTCTAGCGTTCCCCTG 30355
Query 517799 AACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATT 517858
|| | |||||| |||||||| ||| |||| | ||| | | | | | ||||||||
Sbjct 30356 AAGAGGTCTGAGTTGAGTTCTTCAAATCTAGCGCGAGTGATTGAGGTGTAAAAATCAATT 30415
Query 517859 CCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTA 517918
||||| | | ||| |||| ||| || | | ||| || || ||||| | | ||
Sbjct 30416 CCTTCATATAGAGAGTCAATTTCGATGCTTGCTTGGGTGCTGGATGATAGGGTCCTCTTG 30475
Query 517919 GCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTT--TGCTGATTGATTCAAATCTG 517976
|| |||||||| || || | || || | | ||| | || | ||| | | |||
Sbjct 30476 GCGCGTTCACAAGCCGTTCGCAGCCTCCTCACTGCTCTCTTGTT--TTGGCTAATGTCTT 30533
Query 517977 TTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTT 518036
| || | |||||||| || || |||||| | | || | |||||| ||||| ||||
Sbjct 30534 TCTTGTGCTTTCTCTTAAACTCATCAACAAAGTGCTTCACCATACGATTGTCAAAGTCTT 30593
Query 518037 CACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAG 518096
| || ||||| | || | || | || ||| | |||| |||| |||||||||| |
Sbjct 30594 CTCCGCCCAAGTGTGTGTCGCCGGCTGTGGCTTTCACTTCAAAAATACCATCTTCAATTG 30653
Query 518097 ACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTT 518156
|| | | ||| ||| || |||||||||| ||||||||| || ||||| ||
Sbjct 30654 TCAGGATGGATACGTCAAAAGTGCCACCACCCAGATCAAAAATGAGAACATTTCGCTCCC 30713
Query 518157 TGTCTTGGTTT---TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAA 518213
|||| ||| || || |||||||| |||| |||||| || ||||||||||| || |
Sbjct 30714 C-TCTT--TTTCCCTTGTCTAGACCATATGCAATAGCAGCTGCGGTTGGTTCATTGATGA 30770
Query 518214 TTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAAT 518273
|||||| ||||| || |||| ||| ||| |||||||| |||||||| | ||| || |
Sbjct 30771 TTCTCAGTACATTCAGGCCAGAAATAACTCCGGCATCTTTTGTGGCTTGGCGTTGGGAGT 30830
Query 518274 CGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACT-TCTTTACCAATATAAGCG 518332
|||| ||||| ||||| || || || || |||| | ||| |||| |||| ||| ||
Sbjct 30831 CGTTGAAATAAGCAGGGACTGTGATGACTGCATTGGACACTCTCTTCCCCAA-ATACGCC 30889
Query 518333 CTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGC 518392
||| ||| ||||| ||| |||| |||||| || |||| |||||| || | |
Sbjct 30890 TCTGCAATTTCCTTCATCTTAACCAAAACCATTGACGAGATTTCTTCTGGATAAAACGCC 30949
Query 518393 TTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTA 518452
|| |||| || || ||||| | | || || || || | || |||||
Sbjct 30950 TTTATTTCACCTTTGTACTCCACTTCTACTTTGGGCTTGCCACTGTCACTGATGACTTTG 31009
Query 518453 AATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAAT 518512
|| ||||| ||||| || ||||| || | ||||||| ||| | ||| || || | |
Sbjct 31010 AAAGGCCAAAGCTTCATGTCAGATTGCACGATATGGTCATCAAATTTTCTCCCGATGAGT 31069
Query 518513 CGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCT 518572
| || |||||||| || || || | || || || || | || | ||||||||| ||
Sbjct 31070 CTCTTGGCATCAAAGATGGTGTTAGCCGGGTTCATGGCCACCTGGTTTTTGGCTGCGTCA 31129
Query 518573 CCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGA 518632
||||| || | || || || || || | |||||| || || ||||| || || ||
Sbjct 31130 CCAATTAGCCGCTCGGTGTCAGTGAAGGCAACATAACTGGGGGTGGTGCGGTTGCCCTGG 31189
Query 518633 TCATTCGCAATAATTTCAACTTTACCAT 518660
|| || || || || || ||||| ||||
Sbjct 31190 TCGTTGGCGATGATCTCCACTTTGCCAT 31217
>seq44075
Length=47006
Score = 114 bits (126), Expect = 1e-19
Identities = 111/143 (78%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318
|||| |||||| || ||||||||||| ||||| || ||||| |||||||| | ||| | |
Sbjct 5965 GCAGACACATTCAGTATACCATTGGCGTCCAAGTCGAATGTTACTTCAATCTTAGGAATC 5906
Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 517378
|| || || | || |||||||| ||||| |||| | |||| | | |||||||||||
Sbjct 5905 CCCCTTGGACCTGGGGGGATCCCAGTCAAATCAAATTTCCCCAAACTGTTATTATCTTTG 5846
Query 517379 GTGAATTTTCGTTCACCCTCGAA 517401
|| ||| || ||||||||| ||
Sbjct 5845 GTCAATGATCTTTCACCCTCAAA 5823
Score = 102 bits (112), Expect = 6e-16
Identities = 106/139 (76%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 518236
|| || |||| ||||||||| ||||| ||||| ||||| | | ||||||||||||| |
Sbjct 4739 CCGTAAGCAATAGCAGCAGCTGTTGGCTCATTGATAATGCGAAGAACATTAAGACCACAA 4680
Query 518237 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 518296
|| |||||||||||| || || || | || ||||| || || || || || |||||
Sbjct 4679 ATGACTCCTGCATCTTTTGTAGCCTGACGCTGAGAATCATTGAAGTAGGCTGGCACAGTC 4620
Query 518297 ATAACGGCATCAGTTACTT 518315
| ||| |||| | ||||||
Sbjct 4619 ACAACAGCATTATTTACTT 4601
Score = 93.3 bits (102), Expect = 3e-13
Identities = 204/304 (67%), Gaps = 4/304 (1%)
Strand=Plus/Minus
Query 517853 TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCA 517912
||||| || || |||| |||||||| |||||| | | |||||| ||||| | |
Sbjct 5144 TCAATCCCCTCAAACAGAGAATCAATTTCAATGCTTGCTTGAGTGCTGGAAGACAAGGTG 5085
Query 517913 CGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGG--CTTTTGCTGATTGATTCA 517970
|| || || | ||||| ||||| | || | || | | |||||| || || | |
Sbjct 5084 CGCTTGGCCCTCTCACAGGCTGTGCGAAGGCGACGCATTGACCTTTTGTTGGTTCTT--A 5027
Query 517971 AATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAA 518030
||| ||| | || | ||||| || | | | | | || | |||||||||||
Sbjct 5026 TGTCTACTTTGTGCTTACGGTTGAACTCAGTCATAAAGAAGTTCACCATACGATTATCAA 4967
Query 518031 AATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTT 518090
|||||||||| || || | ||||| |||| ||||| | |||| |||| || || |
Sbjct 4966 AATCTTCACCACCTAAATGAGTATCCCCTGCTGTAGCCTTCACTTCAAAAATACCTTCGT 4907
Query 518091 CAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCA 518150
||| | || || | |||||| || || || |||| |||||| || || |||||||
Sbjct 4906 CAATACTCAGAATGGAGACATCAAATGTGCCGCCCCCCAAATCAAAGATGAGCACATTCA 4847
Query 518151 TTTC 518154
||||
Sbjct 4846 TTTC 4843
>seq43642
Length=49772
Score = 95.1 bits (104), Expect = 9e-14
Identities = 91/117 (78%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 517264 CACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCT 517323
||| |||||||||||||||||||| | ||||| ||||||||||| || ||||| |||||
Sbjct 32068 CACGTTAAGAATACCATTGGCATCAATGTCAAAGGTGACTTCAATCTGGGGGACACCTCT 32127
Query 517324 CTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGT 517380
||||||| ||||| || | | ||| ||||||| | || || ||||||||
Sbjct 32128 TGGAGCAGGCGGGATACCAGTGAGCTCAAACTTTCCCAGGATGTTGTTGTCTTTAGT 32184
Score = 86.0 bits (94), Expect = 5e-11
Identities = 104/142 (73%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224
||||| || | ||||| |||| || || || ||||||||||| || || | || |||
Sbjct 33188 TTTTTGTCCAAGCCATAGGCAATGGCTGCTGCTGTTGGTTCATTGATGATACGCAGCACA 33247
Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284
|| || |||||||| ||| |||||||| || || || | || || || || || ||
Sbjct 33248 TTCAGCCCAGCAATAGCTCCAGCATCTTTGGTCGCCTGGCGCTGGGAGTCATTGAAGTAG 33307
Query 518285 GCAGGAACAGTAATAACGGCAT 518306
||||| ||||| | ||| ||||
Sbjct 33308 GCAGGGACAGTTACAACTGCAT 33329
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3778506877855372
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