Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014- 12-02] 46,662 sequences; 679,761,122 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq11038 251 9e-62 seq19576 82.4 9e-11 >seq11038 Length=78219 Score = 251 bits (278), Expect = 9e-62 Identities = 973/1498 (65%), Gaps = 48/1498 (3%) Strand=Plus/Minus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 ||||||| ||||| ||||| | || || | || ||||| ||||| ||| | | Sbjct 23636 CCCACAGCACATGCTCATGAGAGTAGCTGTTGGAATCCACAACACTGATATAGATGCAGC 23577 Query 111671 TTTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCT 111729 | ||||| ||| || | |||| | || ||||| || || | || || || | Sbjct 23576 CATTGAGACCTACAACCTGCTGTCTGAGAAGTG-GTTCACTCATGCCTCTCCCACTCTGT 23518 Query 111730 TCAACGCTGGTACACCAA--GACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGA 111787 ||||||| || |||||| ||||||| | ||||| || ||||| | || | ||||| Sbjct 23517 TCAACGCAGG--CACCAATAGACCCCAGCTCTCCAGCTGCTTCCTGCTGGCCATGAAGGA 23460 Query 111788 GGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGC 111847 || || |||||||||| | || |||| ||||||| | ||||| || | || Sbjct 23459 TGACAGCATTGATGGCATTTATGATACACTCAAACAATGTGCTCTCATCTCTAAATCTGC 23400 Query 111848 TGGTGGTATCGGGAT-GCACATCCATGATGTCAGAGCCAACAAGTC-TCGTATTAGAGGT 111905 || || || || | ||| | || | | ||| | |||| || | ||| || Sbjct 23399 AGGAGGGATTGGTGTAGCAGTTAGCTG-TATTAGATC-AACAGGTAGTTACATTGCTGGA 23342 Query 111906 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 111965 ||||||||| | ||| |||| || | || ||||| | || | ||| ||| || ||| Sbjct 23341 ACAAATGGTAACTCAAATGGCCTTGTGCCGATGCTGAGAGTGTACAACAACACCGCACGC 23282 Query 111966 TATGTAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 112022 || || |||||| ||| | || ||| || | || | || || ||||||||| Sbjct 23281 TACGTGGACCAAGGTGGCAATAAACGACCGGGTGCTTTTGCCATATACCTGGAGCCATGG 23222 Query 112023 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGG 112082 ||| ||| | | || ||||||||| || ||| ||| | |||||| | || Sbjct 23221 CACTTTGATGTGTTTGACTTCCTTGAGCTGAAGAAGAACACTGGTAAAGAGGAGCAGAGG 23162 Query 112083 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 112142 || || ||||||| || || ||||| || ||||| ||||||||||| || || | Sbjct 23161 GCACGAGACCTCTTCTATGCCCTATGGATCCCTGATCTGTTCATGAAGAGGGTGGAAAAC 23102 Query 112143 AGTGGCAATTGGTCTCTCTTTTGTCC-AGACAAGGCACCCGGTCTCTCCGA-TGCCGTGG 112200 | | |||||||| | || || || | || | ||| | || || | || Sbjct 23101 AACCAGGACTGGTCTCTGATGTGCCCCAGTGAGTGCCCTGGGT-TGGATGAGTGTTGGGG 23043 Query 112201 GTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGG 112260 | ||||||||||| |||||||| | || || | || || | | || ||| || Sbjct 23042 G-GAGGAGTTTGAGAAGCTCTACACTCAATATGAACAGGAGGGTAGAGTGAA-GCG--GG 22987 Query 112261 TGC-CA--GCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACAC 112317 || || ||| | ||||| | || || || ||||||| || || || || |||| Sbjct 22986 TGGTCAAGGCTCAGCAGTTGTGGTATGCCATCATCGAGTCTCAGACAGAAACAGGAACAC 22927 Query 112318 CATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGA 112377 | || ||| | |||||||| ||||||||| |||||||| || |||||||||| | Sbjct 22926 CTTACATGTTGTACAAAGATGCCTGTAACAGGAAGAGTAACCAGCAGAATTTGGGCACCA 22867 Query 112378 TCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTG 112437 |||| | ||| | || || || || |||| | |||| ||||||||| ||| | Sbjct 22866 TCAAATGCAGTAACTTGTGCACTGAGATTGTGGAGTATACAAGCAAAGATGAAGTGGCCG 22807 Query 112438 TGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTG 112497 | |||||| | || || || |||||| || |||||| ||| || | || |||| Sbjct 22806 TCTGTAACTTGGCCTCCATTGCTCTCAACATGTATGTTACTCCGGA---ACGCACCTTTG 22750 Query 112498 ATTATGAAAAACT--CCACGAAGTTACGAAA---ACTGTCACAAAAAACCTAAACAGAGT 112552 | | |||| || || || || || ||| | ||| || |||||| |||| | Sbjct 22749 ACTTCAAAAAGCTTGCCTCG--GTCACTAAAGTAATTGT---AAGAAACCTCAACAAGAT 22695 Query 112553 TATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCC 112612 ||||| | || | ||||| ||| || || || || | | | ||| | || Sbjct 22694 CATTGACATTAACTACTACCCAGTTCCTGAAGCAGAGAATTCAAACAAGCGCCACAGGCC 22635 Query 112613 AATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGA 112672 ||| || | ||||| || ||||| || |||| ||||| || || | ||||||| Sbjct 22634 AATCGGGATTGGTGTGCAGGGTCTTGCAGATGCCTTCATCCTCATGCGTTATCCATTTGA 22575 Query 112673 TTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCT 112732 | ||||| || | ||| | || |||||||| || || | || || || Sbjct 22574 AAGCCCTGAAGCCCAGCTGCTGAATATCCAGATCTTTGAGACCATCTACTATGCTGCCCT 22515 Query 112733 TGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCC 112792 ||||| || | |||||||||||| ||||| || ||||| || | || ||||| Sbjct 22514 GGAGGCAAGCTGGGAGTTGGCAGAAAAAGATGGGCCTTATGAGACATACCCAGGCTCTCC 22455 Query 112793 AGCTTCACAAGGGG--TGCTTCAATTTGATATGTGGGAAGGTGAGACCA---AGCTTCAC 112847 || | | || || | || || | ||| ||||||||| | | ||| |||| | Sbjct 22454 AG--TGAGTAGAGGCATTCTGCAGTATGACATGTGGGAAAAGGTGCCCACTGAGCT---C 22400 Query 112848 TACGACTGGGACGCT-CTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTT 112906 | |||||| | ||| || ||||| || | | ||| | | |||||||| || Sbjct 22399 TGGGACTGGAA-GCTGCTTAAGGAGAAGATTGCTAAACACGGTGTGAGAAACAGTCTGTT 22341 Query 112907 GATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGA 112966 | |||| || ||||| ||||||||||| |||||||| | || || ||||| | | | || Sbjct 22340 GTTGGCCCCCATGCCCACAGCCTCCACAGCACAAATACTCGGCAACAATGAGTCCATCGA 22281 Query 112967 ACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA 113026 | ||||||| | |||||||| | ||| |||| | ||||||||| |||||| || Sbjct 22280 AGCCTACACCAGCAACATCTACACACGTAGAGTCCTCTCTGGAGAGTTTCAGATTGTAAA 22221 Query 113027 CAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGAT 113084 | ||||| || | ||||||| || || || ||| | |||| |||||| || Sbjct 22220 CCCACATCTGCTGAAGGACCTCACTGAACGGGGGCTGTGGAACGAGGAGATGAAGAAT 22163 >seq19576 Length=429644 Score = 82.4 bits (90), Expect = 9e-11 Identities = 85/109 (78%), Gaps = 2/109 (2%) Strand=Plus/Plus Query 102192 GCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTC 102251 |||||||| ||| ||||| || ||||||||||| ||||| ||| ||||||||||| Sbjct 416901 GCATTTGCAGCTGTAGAGGGAATTTTCTTCTCTGGATCCTTTGCCGCCATTTATTGGCTG 416960 Query 102252 AAGAAGCGAGGTCTCATGCCAGGTCTCTGCTT-CTCCAACGAGCTTATC 102299 || ||| | ||||| ||||| || || | ||| ||||| || |||||| Sbjct 416961 AAAAAGAGGGGTCTAATGCCTGGGCT-TACTTATTCCAATGAACTTATC 417008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620380336476640