Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq11038 251 9e-62
seq19576 82.4 9e-11
>seq11038
Length=78219
Score = 251 bits (278), Expect = 9e-62
Identities = 973/1498 (65%), Gaps = 48/1498 (3%)
Strand=Plus/Minus
Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670
||||||| ||||| ||||| | || || | || ||||| ||||| ||| | |
Sbjct 23636 CCCACAGCACATGCTCATGAGAGTAGCTGTTGGAATCCACAACACTGATATAGATGCAGC 23577
Query 111671 TTTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCT 111729
| ||||| ||| || | |||| | || ||||| || || | || || || |
Sbjct 23576 CATTGAGACCTACAACCTGCTGTCTGAGAAGTG-GTTCACTCATGCCTCTCCCACTCTGT 23518
Query 111730 TCAACGCTGGTACACCAA--GACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGA 111787
||||||| || |||||| ||||||| | ||||| || ||||| | || | |||||
Sbjct 23517 TCAACGCAGG--CACCAATAGACCCCAGCTCTCCAGCTGCTTCCTGCTGGCCATGAAGGA 23460
Query 111788 GGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGC 111847
|| || |||||||||| | || |||| ||||||| | ||||| || | ||
Sbjct 23459 TGACAGCATTGATGGCATTTATGATACACTCAAACAATGTGCTCTCATCTCTAAATCTGC 23400
Query 111848 TGGTGGTATCGGGAT-GCACATCCATGATGTCAGAGCCAACAAGTC-TCGTATTAGAGGT 111905
|| || || || | ||| | || | | ||| | |||| || | ||| ||
Sbjct 23399 AGGAGGGATTGGTGTAGCAGTTAGCTG-TATTAGATC-AACAGGTAGTTACATTGCTGGA 23342
Query 111906 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 111965
||||||||| | ||| |||| || | || ||||| | || | ||| ||| || |||
Sbjct 23341 ACAAATGGTAACTCAAATGGCCTTGTGCCGATGCTGAGAGTGTACAACAACACCGCACGC 23282
Query 111966 TATGTAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 112022
|| || |||||| ||| | || ||| || | || | || || |||||||||
Sbjct 23281 TACGTGGACCAAGGTGGCAATAAACGACCGGGTGCTTTTGCCATATACCTGGAGCCATGG 23222
Query 112023 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGG 112082
||| ||| | | || ||||||||| || ||| ||| | |||||| | ||
Sbjct 23221 CACTTTGATGTGTTTGACTTCCTTGAGCTGAAGAAGAACACTGGTAAAGAGGAGCAGAGG 23162
Query 112083 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 112142
|| || ||||||| || || ||||| || ||||| ||||||||||| || || |
Sbjct 23161 GCACGAGACCTCTTCTATGCCCTATGGATCCCTGATCTGTTCATGAAGAGGGTGGAAAAC 23102
Query 112143 AGTGGCAATTGGTCTCTCTTTTGTCC-AGACAAGGCACCCGGTCTCTCCGA-TGCCGTGG 112200
| | |||||||| | || || || | || | ||| | || || | ||
Sbjct 23101 AACCAGGACTGGTCTCTGATGTGCCCCAGTGAGTGCCCTGGGT-TGGATGAGTGTTGGGG 23043
Query 112201 GTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGG 112260
| ||||||||||| |||||||| | || || | || || | | || ||| ||
Sbjct 23042 G-GAGGAGTTTGAGAAGCTCTACACTCAATATGAACAGGAGGGTAGAGTGAA-GCG--GG 22987
Query 112261 TGC-CA--GCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACAC 112317
|| || ||| | ||||| | || || || ||||||| || || || || ||||
Sbjct 22986 TGGTCAAGGCTCAGCAGTTGTGGTATGCCATCATCGAGTCTCAGACAGAAACAGGAACAC 22927
Query 112318 CATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGA 112377
| || ||| | |||||||| ||||||||| |||||||| || |||||||||| |
Sbjct 22926 CTTACATGTTGTACAAAGATGCCTGTAACAGGAAGAGTAACCAGCAGAATTTGGGCACCA 22867
Query 112378 TCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTG 112437
|||| | ||| | || || || || |||| | |||| ||||||||| ||| |
Sbjct 22866 TCAAATGCAGTAACTTGTGCACTGAGATTGTGGAGTATACAAGCAAAGATGAAGTGGCCG 22807
Query 112438 TGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTG 112497
| |||||| | || || || |||||| || |||||| ||| || | || ||||
Sbjct 22806 TCTGTAACTTGGCCTCCATTGCTCTCAACATGTATGTTACTCCGGA---ACGCACCTTTG 22750
Query 112498 ATTATGAAAAACT--CCACGAAGTTACGAAA---ACTGTCACAAAAAACCTAAACAGAGT 112552
| | |||| || || || || || ||| | ||| || |||||| |||| |
Sbjct 22749 ACTTCAAAAAGCTTGCCTCG--GTCACTAAAGTAATTGT---AAGAAACCTCAACAAGAT 22695
Query 112553 TATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCC 112612
||||| | || | ||||| ||| || || || || | | | ||| | ||
Sbjct 22694 CATTGACATTAACTACTACCCAGTTCCTGAAGCAGAGAATTCAAACAAGCGCCACAGGCC 22635
Query 112613 AATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGA 112672
||| || | ||||| || ||||| || |||| ||||| || || | |||||||
Sbjct 22634 AATCGGGATTGGTGTGCAGGGTCTTGCAGATGCCTTCATCCTCATGCGTTATCCATTTGA 22575
Query 112673 TTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCT 112732
| ||||| || | ||| | || |||||||| || || | || || ||
Sbjct 22574 AAGCCCTGAAGCCCAGCTGCTGAATATCCAGATCTTTGAGACCATCTACTATGCTGCCCT 22515
Query 112733 TGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCC 112792
||||| || | |||||||||||| ||||| || ||||| || | || |||||
Sbjct 22514 GGAGGCAAGCTGGGAGTTGGCAGAAAAAGATGGGCCTTATGAGACATACCCAGGCTCTCC 22455
Query 112793 AGCTTCACAAGGGG--TGCTTCAATTTGATATGTGGGAAGGTGAGACCA---AGCTTCAC 112847
|| | | || || | || || | ||| ||||||||| | | ||| |||| |
Sbjct 22454 AG--TGAGTAGAGGCATTCTGCAGTATGACATGTGGGAAAAGGTGCCCACTGAGCT---C 22400
Query 112848 TACGACTGGGACGCT-CTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTT 112906
| |||||| | ||| || ||||| || | | ||| | | |||||||| ||
Sbjct 22399 TGGGACTGGAA-GCTGCTTAAGGAGAAGATTGCTAAACACGGTGTGAGAAACAGTCTGTT 22341
Query 112907 GATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGA 112966
| |||| || ||||| ||||||||||| |||||||| | || || ||||| | | | ||
Sbjct 22340 GTTGGCCCCCATGCCCACAGCCTCCACAGCACAAATACTCGGCAACAATGAGTCCATCGA 22281
Query 112967 ACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA 113026
| ||||||| | |||||||| | ||| |||| | ||||||||| |||||| ||
Sbjct 22280 AGCCTACACCAGCAACATCTACACACGTAGAGTCCTCTCTGGAGAGTTTCAGATTGTAAA 22221
Query 113027 CAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGAT 113084
| ||||| || | ||||||| || || || ||| | |||| |||||| ||
Sbjct 22220 CCCACATCTGCTGAAGGACCTCACTGAACGGGGGCTGTGGAACGAGGAGATGAAGAAT 22163
>seq19576
Length=429644
Score = 82.4 bits (90), Expect = 9e-11
Identities = 85/109 (78%), Gaps = 2/109 (2%)
Strand=Plus/Plus
Query 102192 GCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTC 102251
|||||||| ||| ||||| || ||||||||||| ||||| ||| |||||||||||
Sbjct 416901 GCATTTGCAGCTGTAGAGGGAATTTTCTTCTCTGGATCCTTTGCCGCCATTTATTGGCTG 416960
Query 102252 AAGAAGCGAGGTCTCATGCCAGGTCTCTGCTT-CTCCAACGAGCTTATC 102299
|| ||| | ||||| ||||| || || | ||| ||||| || ||||||
Sbjct 416961 AAAAAGAGGGGTCTAATGCCTGGGCT-TACTTATTCCAATGAACTTATC 417008
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620380336476640
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