Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014- 12-02] 46,662 sequences; 679,761,122 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq27510 134 3e-26 seq44130 102 2e-16 >seq27510 Length=34911 Score = 134 bits (148), Expect = 3e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || ||||| || || ||||| ||||| || | || || | |||||||| ||||| Sbjct 29931 GTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGACCATCTTCAAGCTG 29990 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 |||||| ||||| || || | || ||||| ||||| || || |||||||| || || || Sbjct 29991 CTTACCAGCGAAAATCAGCCTCTGCTGGTCAGGAGGGATACCCTCTTTGTCCTGGATCTT 30050 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 | |||||| |||||||||||||| | ||||||||| | || | ||||| || || Sbjct 30051 TGCCTTGACATTCTCAATGGTGTCACTAGGTTCCACTTCCAAAGTGATGGTCTTCCCAGT 30110 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 || || || || || | |||||| Sbjct 30111 CAGGGTCTTCACAAAAATTTGCAT 30134 >seq44130 Length=14217 Score = 102 bits (112), Expect = 2e-16 Identities = 114/150 (76%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||| ||| | ||||| || || ||||| |||| || || | |||||||| Sbjct 11851 ACAAGGTGAAGGGTGAATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCA 11910 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || | ||||| || | || || ||||| ||||||||||| ||||| ||| Sbjct 11911 AGCTGCTTGCCAACAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGA 11970 Query 195052 ATTTTTTGCT-TGACGTTCTCAATGGTGTC 195080 | | || ||| | || || ||| || |||| Sbjct 11971 A-TCTTGGCTATAACATTTTCAGTGATGTC 11999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1108818288797754