Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq27510 104 2e-17
seq31826 91.5 1e-13
seq44130 89.7 4e-13
>seq27510
Length=34911
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 101240 TTTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCG 101299
||||||||||| ||||| | || || || ||||| ||||| || || || ||||| ||
Sbjct 29905 TTTCCTCCTCTCAAACGCAGCACCAAGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCA 29964
Query 101300 GCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGC 101359
| || || | |||| || | |||||||| || || |||| | ||| || || ||
Sbjct 29965 GAGAGGGTGCGACCATCTTCAAGCTGCTTACCAGCGAAAATCAGCCTCTGCTGGTCAGGA 30024
Query 101360 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCC 101419
|| || || ||||| || || || ||| || ||| | || | |||||| | ||||
Sbjct 30025 GGGATACCCTCTTTGTCCTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTAGGTTCC 30084
Query 101420 ACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||||| | ||||| || || || || | || || ||||| || |||||
Sbjct 30085 ACTTCCAAAGTGATGGTCTTCCCAGTCAGGGTCTTCACAAAAATTTGCAT 30134
>seq31826
Length=1572
Score = 91.5 bits (100), Expect = 1e-13
Identities = 94/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 101347 CTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGT 101406
||| ||||| || |||||||| || ||||||||||| || ||| ||| |||| | |||
Sbjct 7 CTGCTGATCTGGGGGAATGCCCTCCTTATCTTGAATCTTGGCTTTAACATTTTCAATAGT 66
Query 101407 GTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTG 101466
|||| | ||||| ||||| || | |||||||| || | ||||| ||||| |||||
Sbjct 67 GTCACTGGGCTCCACCTCAAGGGTAATGGTTTTGCCAGTGAGGGTTTTCACAAAGATCTG 126
Query 101467 CAT 101469
|||
Sbjct 127 CAT 129
>seq44130
Length=14217
Score = 89.7 bits (98), Expect = 4e-13
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|||||||| ||||||| || || ||||| |||| || || | | |||| || | |||
Sbjct 11857 TGAAGGGTGAATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCAAGCTGC 11916
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || |||| |||| | ||| ||||| || ||||||||||| || || ||||| ||
Sbjct 11917 TTGCCAACAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGAATCTTG 11976
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
| | ||| |||| |||| | || || | ||||||| || || || ||
Sbjct 11977 GCTATAACATTTTCAGTGATGTCGCTGGGTTTGACCTGCAGAGTGATGGTCTTCCCAGTG 12036
Query 101447 AAAGTTTTTACAAATATCTGCATG 101470
| ||||| ||||| ||||| |||
Sbjct 12037 AGGGTTTTCACAAAAATCTGTATG 12060
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396053039198334
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |